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CRISPRs details
NC_013201_1
Flanking alignement tool
Page manual
  
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NC_013201_1                                                                                                                 
top
Strain :
Halomicrobium mukohataei DSM 12286
RefSeq :
NC_013201 (plasmid pHmuk01 )
CRISPR id :
NC_013201_1
DR consensus (30 bp) :
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
Number of repetitions :
45
Begin Position :
31920
End Position :
34849
31920
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
TCCGAGACGTGTTCCCTCTCTAGCTGTGCATCTTCC
31985
31986
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
CAGATCTAAAACAATGTCATACGGAAAAATCGACATC
32052
32053
GCTTCAATCCCATAAGGGTCCGTCTAAAAC
GATCCGGAATATGAAGTGACGAACGATCCGGATACGG
32119
32120
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
TCGACGAGATCGGCGCGAACTCGTTCGCTGATACT
32184
32185
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
TCGGGGACCGAGACGACGGGGCCGGGTGCTGTCT
32248
32249
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
CCGGAGGGGCCGCTGCGTGGGTGATCTGGAGAGAAGA
32315
32316
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
GTTGCGTGAGCTAGCGAAACACCGAGTCCGTGTGAT
32381
32382
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
ACGGAAATCCAGCCGATCACCCTCCGAGAGGAGAGG
32447
32448
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
CGGACATTCAGAAGCGCCTGACTAACCGCATGGCT
32512
32513
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
CGGGAAGACCACGACCGCCCGCGCCCTCCAGTTCGA
32578
32579
GCTTCAATCCCACAACGGTCCGTCTGAAAC
GGCTTCTACGTCGGCAACCGGACCGAGGACGGCGATGG
32646
32647
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
AAGTACGCCTCGATCATCAACGGCGTCCGGGCTGT
32711
32712
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
GATGCTGTTGAGCTCGTAGCGATCCCACTCGGCGT
32776
32777
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
AGCCCTTGTGCAATGATCGGGAGTGCAATCCGACC
32841
32842
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
TCAGGCGAGTTGTCGGACGAACAGCTTGAAGCGTGT
32907
32908
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
TCGTCGAGCGGCAGGCCGCCGACCGCTACGGGCTG
32972
32973
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
CGACACGGTCGAAGATGCTGGCAGCTCGCGAATCGC
33038
33039
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
GGATCTCGACGGCCGCGTGGCCGTGCATCTCGGGGTC
33105
33106
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
AACGCTTCAACGCGCTCTATTGACCGAGCGTATCG
33170
33171
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
AGATCTCGCGGATAAGCTGCCCCCGCCCTCCCATGAG
33237
33238
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
CACTTCGAGCGGACTTTGGGCCACCCCGGAAAGTCAG
33304
33305
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
CGATACGTCCGGGACGCCCGTGACGACCACCACTGC
33370
33371
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
GGAGGAGCGGATGGACATGAGCGACACGACGATCCG
33436
33437
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
GAGCATCTCTCCAATCAGCGGTCATCAACCGCGA
33500
33501
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
AGTATCTGTCTACGCGATACCGCACCGTCAGAGTG
33565
33566
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
TACGACCTTCCCACTGAGGGTCTTGAGCTAACGATT
33631
33632
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
GCGACGTGCTTACCTCTGACGCCAATATTGACCTT
33696
33697
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
TTCATCAAGAGGCACACAAGCATGGTGCGTCCAAA
33761
33762
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
CTGGCCTACCCGAGTCGGTTCCCCGCAGCACTCGCA
33827
33828
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
ACGATCGTCACCGACACCCTCGGGGCCGGCGGCGC
33892
33893
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
GAAACGACCGAGACGCAAAGCGAGTTCACACAACTC
33958
33959
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
TTAGATGATCAGGTAGCCTGCTACCAGTGCAGCTGC
34024
34025
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
GAGACCCAGCTTTGCCTTCCAGGTGATCAGCTCGTA
34090
34091
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
TCGAAGCGCTCGGTCGCGACGGAGACCAGCGACCAGCTG
34159
34160
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
TGACGACCACACACACGAGGCCGTGCGTGTGCTTGTA
34226
34227
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
CCACGTCCCGGTGACACGCAGCTCGGTGAGATCGC
34291
34292
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
CATGGAGTCTTCAACATTTCATGGGCTGGGCTTGGCC
34358
34359
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
CGCAACCCGACGATCGAGGACGGGCCGTCCCTGGA
34423
34424
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
GCGTCGGACTGCGTCGATAGTGTTCGTGCTCATGTT
34489
34490
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
CAGACTTCTACTGGAAGGCGAAAACTGAGAAGGCA
34554
34555
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
TACGCTCGACGACCTCCGTCGTGCGCTCCAGAAGTCA
34621
34622
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
GCGCTGCGGACGTGGTGTCAGAGGGGTTACCAGTAACT
34689
34690
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
ACTCCGGGTACACTGGTGGCGATGCTCTACTCGCC
34754
34755
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
ACACGTTTCTTTTTTTCAGGAGCCATCACTCACTC
34819
34820
GCTTCAATCCCACAAGGGTCCGTCTGAAAC
34849
Left flanking sequence : Till position 31920 (length
bp)
TGGAAGCCCTGTGGAAGTCGCCGGACGATACCGTCTAGCTTCGATCTCAGTTTGCCGTCTGAAACCAGTC
CGGCGACGATTCGTCTCGTCGAGGCTTCTT
Right flanking sequence : From position 34849 (length
bp)
CATGGTCGATTTGACCACGTATACACTGCTACTTGCCGTTTGCACTTCATCGTTTCCGTCGACCCTCGAT
ACCCCTCGAACCCCCCGGGGGTCGATGGAA
Print the CRISPR sequence : From position
bp To position
bp