Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_013282_2                                                                                                                 top


Strain : Cronobacter turicensis RefSeq :NC_013282 (chromosome circular)
CRISPR id : NC_013282_2
DR consensus (29 bp) : CTGTTCCCCGCGCGAGCGGGGATAAACCGNumber of repetitions :38
Begin Position : 1103027 End Position : 1105312

1103027CGTTAGCTGTTCCCCGCGCGAGCGGGGATTGTGGCACGATACAGGCACGCGGGGCGCGGGG 1103087
1103088GCGGGGCTGTTCCCCGCGCGAGCGGGGATAAGTTTTGCCGTTAAATTACCCCCTCCAACGG 1103148
1103149CAACGGCTGTTCCCCGCGCGAGCGGGGATGAGCTGTTTGCTAACGCCCGGCGTTGCTTCGA 1103209
1103210CTTCGACTGTTCCCCGCGCGAGCGGGGATCGGCGTCGTATTAACGCCACGGTCGCGCATAA 1103270
1103271GCATAACTGTTCCCCGCGCGAGCGGGGATCAGCCGTTTAAAGAGGTGGAGCAGCTCGCGAA 1103331
1103332CGCGAACTGTTCCCCGCGCGAGCGGGGATGCCGAGCCCGTTACGGCGGCCATCGCCGTGGA 1103392
1103393CGTGGACTGTTCCCCGCGCGAGCGGGGATGGATTATGATGAATAAATCATATGCATCTTTG 1103453
1103454TCTTTGCTGTTCCCCGCGCGAGCGGGGATGTAATGACATCAATTTGTGCGCAAAAGGTATT 1103514
1103515GGTATTCTGTTCCCCGCGCGAGCGGGGATCCGGTGAGCTGTGCGAACAGCGCTTCAACCGC 1103575
1103576AACCGCCTGTTCCCCGCGCGAGCGGGGATTTAGTGAACATCATAAACATTATCAAAGAAAG 1103636
1103637AGAAAGCTGTTCCCCGCGCGAGCGGGGATAACAGTGACGCTTTCAGAATATCGTCCACTTC 1103697
1103698CACTTCCTGTTCCCCGCGCGAGCGGGGATTCAGGGAGAAAAAATCTCAATATCAGGCAAGG 1103758
1103759GCAAGGCTGTTCCCCGCGCGAGCGGGGATCTTCAGGTTTCCGACCTGCCTAACGCCATGCA 1103819
1103820CATGCACTGTTCCCCGCGCGAGCGGGGATTTTTGATTGAGTGCCTGGAATGCGGAAAAAAA 1103880
1103881AAAAAACTGTTCCCCGCGCGAGCGGGGATACCGTAGAGCAGAACATCATTGCCCAGGTTGA 1103941
1103942GGTTGACTGTTCCCCGCGCGAGCGGGGATGAGTGGTACGCGCAGTGCCATACCGCCGATTC 1104002
1104003CGATTCCTGTTCCCCGCGCGAGCGGGGATTACCAGCATATGACCATAACACCAGGTGACGT 1104063
1104064TGACGTCTGTTCCCCGCGCGAGCGGGGATTACTCGTCTGAGAGCTGCTGATTGCTGACGCT 1104124
1104125GACGCTCTGTTCCCCGCGCGAGCGGGGATGCGAGACACAATAGAGGCAGCAGGCAGTCAGT 1104185
1104186GTCAGTCTGTTCCCCGCGCGAGCGGGGATCGCCTCAGGGTCATGTAGAGCCTTCGCCATCA 1104246
1104247CCATCACTGTTCCCCGCGCGAGCGGGGATGGCTGGCTGCTGCTGGCGAGCTGTGGGAAGAA 1104307
1104308GAAGAACTGTTCCCCGCGCGAGCGGGGATTTTGCCGGCGGGATGCTGCTGGCCGCAGCGCT 1104368
1104369AGCGCTCTGTTCCCCGCGCGAGCGGGGATGATTTATAAAAGAAGATGATGTTTATTTCAGG 1104429
1104430TTCAGGCTGTTCCCCGCGCGAGCGGGGATATTTTGGAAATACACCAAAGCGCGGTGAAAAA 1104490
1104491GAAAAACTGTTCCCCGCGCGAGCGGGGATGTTTCGCTTTAATAGAATCAGTACGAACAGCA 1104551
1104552ACAGCACTGTTCCCCGCGCGAGCGGGGATCTGGCAAGATGCGCCAGCGCGCCGAGTGCGGA 1104612
1104613TGCGGACTGTTCCCCGCGCGAGCGGGGATTACTGACAATAATTGCTGGCATATAAACCCCC 1104673
1104674ACCCCCCTGTTCCCCGCGCGAGCGGGGATCCGGGATAATCCAGTCATTTACGGCGCCGCGT 1104734
1104735CCGCGTCTGTTCCCCGCGCGAGCGGGGATCGAGATGCGCCTGATGCACGACGCCGGGCGGC 1104795
1104796GGCGGCCTGTTCCCCGCGCGAGCGGGGATTCGGTCGGCTCGTCAGACAGCACGCTGAATTT 1104856
1104857GAATTTCTGTTCCCCGCGCGAGCGGGGATGCCTGGCGCGCTGCGTTCTGGCAAACCACCGA 1104917
1104918CACCGACTGTTCCCCGCGCGAGCGGGGATGGCGCGCAGTACCGGCGCAGGAGGTTGACCAC 1104978
1104979GACCACCTGTTCCCCGCGCGAGCGGGGATTTATTTCCGTTGCTCCTAAAACTCGCGGGAAC 1105039
1105040GGGAACCTGTTCCCCGCGCGAGCGGGGATGCTTTCACGCAGCGGATAAGCTCGGCTCTGTG 1105100
1105101TCTGTGCTGTTCCCCGCGCGAGCGGGGATAAATTTCGTGTGTACTCGACTCAGCTATCGCT 1105161
1105162ATCGCTCTGTTCCCCGCGCGAGCGGGGATATCCGGATGACTGGCAAATCGTGGACACAGAC 1105222
1105223ACAGACCTGTTCCCCGCGAGAGCGGGGATCGGCGCACCACGGCGTATCATCGTCTTTAATC 1105283
1105284TTAATCCTGTTCCTCGCGCGAGCGGGGAT1105312
Left flanking sequence : Till position 1103027 (length bp)
CAAAATCAACAGGGCAGCCGTTCTTTAACAAGATGGGTTGTTGTAAAAATGTTGGTAGGATGTGGATGGC
GAAAAAATCATAAGCAGTACAAAGGGTTAC
Right flanking sequence : From position 1105312 (length bp)
AAACCGTATTCCTGGCGTGCCTGTTATTTAATAAATAGCAAACGCTCATGCATTGGCAGTAAATGATTAG
TTTTAACATGCGTTTACATGAGTTGAATTT
Print the CRISPR sequence : From position bp To position bp