Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_013421_1                                                                                                                 top


Strain : Pectobacterium wasabiae WPP163 RefSeq :NC_013421 (chromosome circular)
CRISPR id : NC_013421_1
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :17
Begin Position : 436573 End Position : 437578

436573GTGTTCCCCGCGCCAGCGGGGATAAACCGCCAACATGCTGGGTTGTTCACACGCGACACGGC 436634
436635GTGTTCCCCGCGCCAGCGGGGATAAACCGCATTTGATTCTATGAATCGCATCTCAGGGAAC 436695
436696GTGTTCCCCGCGCCAGCGGGGATAAACCGCTCTGATGTTGCGTGTGCTGGGATTTGATGTG 436756
436757GTGTTCCCCGCGCCAGCGGGGATAAACCGCAAATGGCTAAGCGCGGTTATCCGTGGGCTGA 436817
436818GTGTTCCCCGCGCCAGCGGGGATAAACCGCAATGGCAGATTTCGCCAGGCGCTTGAGGAAA 436878
436879GTGTTCCCCGCGCCAGCGGGGATAAACCGTCTTTACACTCAATTCGCAATATTTCGTGAC 436938
436939CGTGTTCCCGCGCCAGCGGGGATAAACCGGTTCTTAGATTACAAAAAGCTCCGGTAGAGCA 436999
437000GTGTTCCCCGCGCCAGCGGGGATAAACCGATGGCACCGTTTTAAGCGGTCGCACATCTGCA 437060
437061GTGTTCCCCGCGCCAGCGGGGATAAACCGCTGTGGCTGAGCTATTTCGTGCGCGTCGTTGA 437121
437122GTGTTCCCCGCGCCAGCGGGGATAAACCGAGAAAAATACTCAATCGTGGTCGTGCCGAAAC 437182
437183GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGTTGAGCGCGAGGCGATGAACGCCATTTT 437243
437244GTGTTCCCCGCGCCAGCGGGGATAAACCGTGCTCGCAACGTTTGCGTATCAGGACTACGCA 437304
437305GTGTTCCCCGCGCCAGCGGGGATAAACCGAGTGAAACCATCGGCCAACGAATACGTAGACG 437365
437366GTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCGGTATCCAGAAACCGCGTTACTACTCGT 437426
437427GTGTTCCCCGCGCCAGCGGGGATAAACCGTGCTAATTTGTAACCTTCCGGTATTACCGGAGG 437488
437489GTGTTCCCCGCGCCAGCGGGGATAAACCGTTCCAACCCTTTCAGCAAGCTCTACCTGAGTA 437549
437550GTGTTCCCCGCGCCAGCGGGGATAAACCC437578
Left flanking sequence : Till position 436573 (length bp)
TATTGAAAATCAATAAGTTAGCGATCTTTAACAACATGGAAAAATCGGTGGGATTTTTTCTACCGAAAAA
AGTGTTATAAAACAACTCTCTACTTTTAGA
Right flanking sequence : From position 437578 (length bp)
TAATCCGTGGAAGCGGCTACAGGATTAGCTGTTCTGGTTCGCAGTGGTACAGCTTAGCCAGCTTTTCTCG
GGTGCGCTTCTGCGGCCTTGAATCTGGGGA
Print the CRISPR sequence : From position bp To position bp