CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_013502_2
Flanking alignement tool
Page manual
  
Home Page
NC_013502_2                                                                                                                 
top
Strain :
Rhodothermus marinus DSM 4252
RefSeq :
NC_013502 (plasmid pRMAR01 )
CRISPR id :
NC_013502_2
DR consensus (37 bp) :
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
Number of repetitions :
12
Begin Position :
32202
End Position :
33116
32202
ATTGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GCTGGTGCGGACCTACGGCGACGTGAAGCTCATCATGGC
32277
32278
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GAAGGAAATGTTCAACGGGCCCAAGGGGCGTCGGGCCCACAAA
32357
32358
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GAAGGAAATGTTCAACGGGCCCAAGGGGCGTCGGGCCCACAAA
32437
32438
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
CAGAAGTTCTGGTTGGTGGTGTGTAACAACAACAACA
32511
32512
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GTGGGCCCAGAAGCAGGGCTTTGCTCGCGTAAGGCGCGGCAA
32590
32591
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GATTATCCCCACTGTCGACGGATATGAGTGGGGTGGCTGGGATGA
32672
32673
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
AGAAGGGGCAATCGGCCCGGAGTCTACCTGCTCTCCAGGCGGAGAG
32755
32756
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
AAAATCAATCAGGCTGGCTTCGTGGTAATTGCGAAGTGT
32831
32832
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
CTGTATGTTTCTGTGGCGGTTAAAATGAGAGAGAAGCATGACACTGC
32915
32916
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GTGGAGAAAACTCGAAAGGGCTACCCCGCCCTATGGGAACGGGG
32996
32997
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GACACATCTTCGTCGTGAGCGCTCAGTCCCAGCACAGGGCTATTGA
33079
33080
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
33116
Left flanking sequence : Till position 32202 (length
bp)
ATGCTTCAGGGAAGAAAAGCAAGACGACACGTCCCTGTCAAGACCGTGTCCTGCTGCCCCCGAAAAGCCT
CTTTCCTGTCGATTGTCTCGTCTAAAGCGG
Right flanking sequence : From position 33116 (length
bp)
CCCATTGTTACGGGGCCACTCAGAACCGGCCTTTTTGCGGTCAAACGGGCCGATTTTTGCGTGCGCAGAA
CACCAAAAAACGGAACGAAATTTGCTCTCA
Print the CRISPR sequence : From position
bp To position
bp