Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_013510_8                                                                                                                 top


Strain : Thermomonospora curvata DSM 43183 RefSeq :NC_013510 (chromosome circular)
CRISPR id : NC_013510_8
DR consensus (29 bp) : CGGACCACCCCCGCCTGCGCGGGGAGCACNumber of repetitions :63
Begin Position : 1050708 End Position : 1054520

1050708CGCACTGTCCCCGCTTACCTGGGAAGCACGCACCCTCGATTCGAGCAAGCTTGGCTCTGTC 1050768
1050769CAGACCACCCCCGCCTGTGCAGGGAGAACAGGGCAAAAGCTAACCCCCTGGCTACAGAAGG 1050829
1050830CGGACCACCCCCGCCTGCGCGGGGAGAACCCCTGAAGCCCGAAGGAGGACCCGTGGCGCAG 1050890
1050891CGGACCACCCCCGCCTGCGCGGGGAGAACCGCGCCCTCGGGCTGACCGGACAGTTGGACAT 1050951
1050952CGGACCACCCCCGCCTGCGCGGGGAGCACGTAGTTCGATGAATTCTTCAGGGGTGCAGTAG 1051012
1051013AGGACCACCCCCGCCTGCGCGGGGAGCACCTGAACGCCCGCATCCGCGCCCGGCGTACCGA 1051073
1051074CGGACCACCCCCGCCTGCGCGGGGAGCACGGCGGCGAACCGACCACTCCCGTGCCCGACCA 1051134
1051135CGGACCACCCCCGCCTGCGCGGGGAGCACTGTTGCGTTTCCAGGTTCTCCCAGCTCAGACG 1051195
1051196CGGACCACCCCCGCCTGCGCGGGGAGCACTCGATCCGGCCGCCCAGCACGCGCCGCCGGTA 1051256
1051257CGGACCACCCCCGCCTGCGCGGGGAGCACCCAGCAAAGAAGCCCTTGGCGGCGTCGGAGAA 1051317
1051318CGGACCACCCCCGCCTGCGCGGGGAGCACGGTGCTGTCCACCGCCGGCGGGGCCACCAGCT 1051378
1051379CGGACCACCCCCGCCTGCGCGGGGAGCACGGAGCCGTCGTCCTCGGCCCCCCTGAGACCAC 1051439
1051440CGGACCACCCCCGCCTGCGCGGGGAGCACCTGCTAGGCGGTGGGATCGCCTAGTGGGGCCG 1051500
1051501CGGACCACCCCCGCCTGCGCGGGGAGCACGGCACGTAGCCTTGTCGGTCATGGGGGTTGTC 1051561
1051562CGGACCACTCCCGCCTGCGCGGGGAGCACGCGGGCTTCGAAGCCGAACGCGGTGACTAGGT 1051622
1051623CGGACCACCCCCGCCTGCGCGGGGAGCACAGAGAGCACCACCGGCACACCGTGTCGCCACG 1051683
1051684CGGACCACCCCCGCCTGCGCGGGGAGCACATCGCATCCTGCTGCAAGGTGCGAGTGAACCG 1051744
1051745CGGACCACCCCCGCCTGCGCGGGGAGCACGGCCTGCGGGATGCGTTTGATGTTGGCGAGGA 1051805
1051806CGGACCACCCCCGCCTGCGCGGGGAGCACTACGACTATGTGGAGCTGGAGGACGAGGTCGG 1051866
1051867CGGACCACCCCCGCCTGCGCGGGGAGCACCCGCGAACTCCCCTGACCGTCCATCCCCACGC 1051927
1051928CGGACCACCCCCGCCTGCGCGGGGAGCACTAGGGATGCCGCGCTCGTTGAAATCGGCGCAG 1051988
1051989AGGACCACCCCCGCCTGCGCGGGGAGCACCAGACCCGCATCGTCTACTCCACCCGCGTCGG 1052049
1052050CGGACCACCCCCGCCTGCGCGGGGAGCACTCCCGCAACCGCTGCCGTAGCTCCTCCCGCTG 1052110
1052111CGGACCACCCCCGCCTGCGCGGGGAGCACCTGGCCGTGACGAACATGGTCAGCGAGAACAC 1052171
1052172CGGACCACCCCCGCCTGCGCGGGGAGCACATCTTGGTGCAGTCGAAGGTGTCCGGCTCCAC 1052232
1052233CGGACCACCCCCGCCTGCGCGGGGAGCACTCCAACGCGGTCCGGGCCCGGTCCCACCACTG 1052293
1052294CGGACCACCCCCGCCTGCGCGGGGAGCACACGACGTGATGAGCGGCGGGCTGTTGGCAAAT 1052354
1052355CGGACCACCCCCGCCTGCGCGGGGAGCACGGCCGTGTATGTACGGGACCGGCAGCCGTTCG 1052415
1052416TGGACCACCCCCGCCTGCGCGGGGAGCACTGCCACGCCGCGGAGCGTGATCCCCTGAGCCAC 1052477
1052478TGGACCACCCCCGCCTGCGCGGGGAGCACGCGCCGCAGCATTCGCGATGATCCGACCAGTG 1052538
1052539CGGACCACCCCCGCCTGCGCGGGGAGCACAGGACCCCGGCGAAGACGACCTGTGGCAGGAT 1052599
1052600CGGACCACCCCCGCCTGCGCGGGGAGCACTCGAGAGATGCGCACCGGACCAAACTCGCCGA 1052660
1052661AGGACCACCCCCGCCTGCGCGGGGAGCACCTCGCCGAATTCCGCGATCCCATACGGGGCCT 1052721
1052722CGGACCACCCCCGCCTGCGCGGGGAGCACCAGTGTCAGGCGGTAGGCTGCACCGATCTCCG 1052782
1052783CGGACCACCCCCGCCTGCGCGGGGAGCACATCGTCAAGAATTTCCTCGGCGGCCTAAAGAA 1052843
1052844CGGACCACCCCCGCCTGCGCGGGGAGCACCGCGGGTGCGGCTGCGTGGGTCGCCTAGCGCC 1052904
1052905CGGACCACCCCCGCCTGCGCGGGGAGCACAGCTCATGAGTGACCTGCATCAGGAAGCCATA 1052965
1052966CGGACCACCCCCGCCTGCGCGGGGAGCACGCCGATCAGAACGCGGCGATCACGGCCGTGAG 1053026
1053027CGGACCACCCCCGCCTGCGCGGGGAGCACTGGGCGCCCCGGCTGGTCCCCGGGGCGTTCTG 1053087
1053088CGGACCACCCCCGCCTGCGCGGGGAGCACGGCGCCACGCTCGCCGTCGACAGCTCGGCGTA 1053148
1053149CGGACCACCCCCGCCTGCGCGGGGAGCACCCATGCGCGGGCCCGCCCCGAGGTTGCAAGTA 1053209
1053210CGGACCACCCCCGCCTGCGCGGGGAGCACCCCGTGTGGCTGTCCCGCCACTCAGGGAACGC 1053270
1053271CGGACCACCCCCGCCTGCGCGGGGAGCACCGCGGCAAGCACGCTTTTCGCGCAGCGTCAGG 1053331
1053332CGGACCACCCCCGCCTGCGCGGGGAGCACTTGTAGAGGACCCTCCGCCGCAGGGTGACCGG 1053392
1053393CGGACCACCCCCGCCTGCGCGGGGAGCACTGCATCCACCAGCAGCAGTCCGCACCCCAGCC 1053453
1053454CGGACCACCCCCGCCTGCGCGGGGAGCACGAGCGCACATCATCCATGCTGTCGCCGTAAGC 1053514
1053515CGGACCACCCCCGCCTGCGCGGGGAGCACGGGAAGCGGGAGAGGTACTCATCAAGGTGCTC 1053575
1053576CGGACCACCCCCGCCTGCGCGGGGAGCACTGTCTGGCCGACGCCGAAGACTTCCTCGGCCA 1053636
1053637CGGACCACCCCCGCCTGCGCGGGGAGCACGCCTCCTCGCGGGCCTCGGCGGCCCGCAGCGC 1053697
1053698CGGACCACCCCCGCCTGCGCGGGGAGCACGACGTAGAGAGGGGGCTGGACATGTGGGCGAA 1053758
1053759GGGACCACCCCCGCCTGCGCGGGGAGCACCGCACCCACGCCTGCACATCCAGACGGCGCAC 1053819
1053820CGGACCACCCCCGCCTGCGCGGGGAGCACTGACCGGGCGGGGCGACGGCCTGGGTGGCCTG 1053880
1053881AGGACCACCCCCGCCTGCGCGGGGAGCACCTCGCGCCCCACACCGACGGCCAGGCAGACCC 1053941
1053942CGGACCACCCCCGCCTGCGCGGGGAGCACAACGCTCGCCGCAGGGCGTGCACCTCGGCGGC 1054002
1054003CGGACCACCCCCGCCTGCGCGGGGAGCACACCGAGGCTCAATTCAAGCGGTTCACTCGCACC 1054064
1054065TGGACCACCCCCGCCTGCGCGGGGAGCACGAAGAAGACGAAGGGTGAGGGCTGATGCCCAC 1054125
1054126CGGACCACCCCCGCCTGCGCGGGGAGCACGGCGACCCGTCGGACGCCTCCGCCCCCTCCGT 1054186
1054187CGGACCACCCCCGCCTGCGCGGGGAGCACCAACCTTTCGAAGTGCGCCTGGTTGTCGCCGC 1054247
1054248CGGACCACCCCCGCCTGCGCGGGGAGCACCGTAGGGGCCGGACAGGTTGCTCGGGTCGAAC 1054308
1054309CGGACCACCCCCGCCTGCGCGGGGAGCACTCGTACTGCTCCTCGCCCAGCATGGCCTGGGC 1054369
1054370CGGACCACCCCCGCCTGCGCGGGGAGCACCCGGCGTCCAGCAGCCCGACCAGGGCCGTCCC 1054430
1054431CGGACCACCCCCGCCTGCGCGGGGAGCACGATGTCTACGTCGGTCAGCGGCCCAAACCCTA 1054491
1054492CGGACCACCCCCGCCTGCGCGGGGAGCAC1054520
Left flanking sequence : Till position 1050708 (length bp)
CTGCCCACCTGGGCAAGCCAGTGCCTACCCAGGAGAAACTCCTGACGCTCTGCCCGCACAAGAAGAACCG
CGAGGGGCTGGCAGGAAGTTAGCGAGATAA
Right flanking sequence : From position 1054520 (length bp)
CCCTTGCTGACCTGGGATTATAGGGCGGCGTTACTGATTTGTGACCTTGTGGATTGGAGTGAAGGCTGGA
CTGGCACGAGAGGGAGTCTATGCATCTTGG
Print the CRISPR sequence : From position bp To position bp