Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_013892_6                                                                                                                 top


Strain : Xenorhabdus bovienii SS-2004 RefSeq :NC_013892 (chromosome circular)
CRISPR id : NC_013892_6
DR consensus (29 bp) : GTGTTCCCCGTAGGTACGGGGATAAACCGNumber of repetitions :8
Begin Position : 3646437 End Position : 3646891

3646437GTGTTCCCCGTAGGTACGGGGATAAACCGGTTCAAATGTATACATTTTCACTCTTATTGT 3646496
3646497GTGTTCCCCGTAGGTACGGGGATAAACCGGAGACTCACGCCATGTCATGACTGAAAAATTT 3646557
3646558GTGTTCCCCGTAGGTACGGGGATAAACCGATGATGCCACGTTACTATTCGCCATACCTAAT 3646618
3646619GTGTTCCCCGTAGGTACGGGGATAAACCGTTTTCATATAGGACTCATCAGGATCAGCCAAT 3646679
3646680GTGTTCCCCGTAGGTACGGGGATAAACCGTCTATTGAGCGTCCAGCACTGAGTTTATTGTC 3646740
3646741GTGTTCCCCGTAGGTACGGGGATAAACCGGTAATGCCGGATTAAAAACGGGGATTGAAATT 3646801
3646802GTGTTCCCCGTAGGTACGGGGATAAACCGCCTGCAATGGGAACATACTTCGCGGGGTCGTA 3646862
3646863GTGTTCCCCGTAGGTACGGGGATAAACCA3646891
Left flanking sequence : Till position 3646437 (length bp)
CCACTTCCTGAGGGTTAATTTTGATCGCGTTTTAGGCTTTTAAAGTGGTAGAATTTTTATGCTCAATAAA
GTCATTTTAAAACAAATGGTTATATTTAGA
Right flanking sequence : From position 3646891 (length bp)
ACAGCAGAACATATCTTCCCATAATAGCAAGACTCACTATGACTCAAACTCGTCATAGAGAAATTGTTTT
CACTAAAGTCACTATACGAAATATTCAACT
Print the CRISPR sequence : From position bp To position bp