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CRISPRs details
NC_013894_2
Flanking alignement tool
Page manual
  
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NC_013894_2                                                                                                                 
top
Strain :
Thermocrinis albus DSM 14484
RefSeq :
NC_013894 (chromosome circular)
CRISPR id :
NC_013894_2
DR consensus (29 bp) :
CTTTCAACTCCACACGGTACATTAGAAAC
Number of repetitions :
41
Begin Position :
177442
End Position :
180135
177442
TTTTCAACTCCACACGGTACGTTAGAAAC
TAGCTCTTGCAAGTTCAGATTTTCTTTGAAACTCAAA
177507
177508
CTTTCAACTCCACACGGTACATTAGAAAC
ACAGAGAGGTCTTAGTAAATTCTGGGCTGAACGTTAC
177573
177574
CTTTCAACTCCACACGGTACATTAGAAAC
TCTCCCCGTAAAGCGGATACTTCATCTGTCAGAGCAT
177639
177640
CTTTCAACTCCACACGGTACATTAGAAAC
TAGAAGATGATGAAAACTCGTTCCCTGTTGTCTCCC
177704
177705
CTTTCAACTCCACACGGTACATTAGAAAC
CTGACTATAAAAACTTTTTCGTTGCTCAAATCATAA
177769
177770
CTTTCAACTCCACACGGTACATTAGAAAC
ACAGAGAGGTCTTAGTAAATTCTGGGCTGAACGTTAC
177835
177836
CTTTCAACTCCACACGGTACATTAGAAAC
TCTCCCCGTAAAGCGGATACTTCATCTGTCAGAGCAT
177901
177902
CTTTCAACTCCACACGGTACATTAGAAAC
CTCCACAGCTATGAAGCGTATGAGAAGTTAATGGATCTGAAG
177972
177973
CTTTCAACTCCACACGGTACATTAGAAAC
CATGCGTGAGAGACTTATCTATGTAATTTATCCCCTCA
178039
178040
CTTTCAACTCCACACGGTACATTAGAAAC
AAGAAAACACGTTCTCCAAAGCTCCCGCCACTTCCTG
178105
178106
CTTTCAACTCCACACGGTACATTAGAAAC
GGGGCAGTTTAGGAGCTTCGGCGGGTTGGGTAGTTTG
178171
178172
CTTTCAACTCCACACGGTACATTAGAAAC
AGCCTAAAAGTCAGATGATTGGCACGATGTTTGCTAT
178237
178238
CTTTCAACTCCACACGGTACATTAGAAAC
ACCCAGTGAAGGAAGTCCCCGTGTCAAAACTACTCCCAT
178305
178306
CTTTCAACTCCACACGGTACATTAGAAAC
AATACTAGACAAGGATGAAATCCGTAAGGCACTAAAGCT
178373
178374
CTTTCAACTCCACACGGTACATTAGAAAC
GGGGCAGTTTAGGAGCTTCGGCGGGTTGGGTAGTTTG
178439
178440
CTTTCAACTCCACACGGTACATTAGAAAC
TTTAACTATGAGCCTGTCGCATATTTCCTTGAGCATC
178505
178506
CTTTCAACTCCACACGGTACATTAGAAAC
TGTCCACAATCTTCACTATCTGCGTTGGAATCACCTT
178571
178572
CTTTCAACTCCACACGGTACATTAGAAAC
CCGTACACCGCTACCCGTAGTTCCTTACCCCAATGAGA
178638
178639
CTTTCAACTCCACACGGTACATTAGAAAC
AGGGACGTTTTTGTTGCGTGCGTGCGTGCGTGC
178700
178701
CTTTCAACTCCACACGGTACATTAGAAAC
AAGGGCTTAATGCTATTAAATTCGGTCAAGGATAAAA
178766
178767
CTTTCAACTCCACACGGTACATTAGAAAC
CCTTTTAGGGACATCCCTCATGCCTTCTATGTCAAGCCTATG
178837
178838
CTTTCAACTCCACACGGTACATTAGAAAC
AGAAATACATGTACTGCTGTTATGACAGTGTGTTTGCA
178904
178905
CTTTCAACTCCACACGGTACATTAGAAAC
CCATGATCACGGTGAGAGTTCTTGAAAAGAATAATGA
178970
178971
CTTTCAACTCCACACGGTACATTAGAAAC
GTGAAGATAGATAGCCCCGATGAGGCTCTGGATGCTTT
179037
179038
CTTTCAACTCCACACGGTACATTAGAAAC
GACAGGTTCAAACTCCCACGACCTCATGGCTAAATACTGT
179106
179107
CTTTCAACTCCACACGGTACATTAGAAAC
AGTGGTCAGGGAGGAGTTTGACCCCAGACAACTGAGA
179172
179173
CTTTCAACTCCACACGGTACATTAGAAAC
AGTGGTCAGGGAGGAGTTTGACCCCAGACAACTGAGA
179238
179239
CTTTCAACTCCACACGGTACATTAGAAAC
TCTTGATAGTGTTCCAACTCCTTGCCCGCCTTGAGGAG
179305
179306
CTTTCAACTCCACACGGTACATTAGAAAC
TGTAATCTTGTCAATGCTTTCTTGATAAGATTTGACA
179371
179372
CTTTCAACTCCACACGGTACATTAGAAAC
TGCTTCCATAATGGTTATATGATTTTTACAATCAATAAC
179439
179440
CTTTCAACTCCACACGGTACATTAGAAAC
AAACGTCAGGTCTTTCGCTCAGTTATCATTACATTTAC
179506
179507
CTTTCAACTCCACACGGTACATTAGAAAC
ACATCTACATAGTTCTTGCTGATTACATGCTTCCTTATTTTC
179577
179578
CTTTCAACTCCACACGGTACATTAGAAAC
ATTCCTCATAGAGGCTTTTCACCTCCTGAGGAATTTC
179643
179644
CTTTCAACTCCACACGGTACATTAGAAAC
TGAATATGTGCCAGAAGACTCCGACGGCAAAAAACTC
179709
179710
CTTTCAACTCCACACGGTACATTAGAAAC
TTTAGCCAGTCCTTGAATGGTAATGTTCTTAAATAG
179774
179775
CTTTCAACTCCACACGGTACATTAGAAAC
AAGTATTAACTTCTTTAGCTTTTTGAGAGCAAGCTTG
179840
179841
CTTTCAACTCCACACGGTACATTAGAAAC
GGTATGTTAATTGGAGGAATGGGTGGTGGCATGATGGG
179907
179908
CTTTCAACTCCACACGGTACATTAGAAAC
CATCTTTTCTGCAAAAGACAGAGCAAGGGCATACATAGA
179975
179976
CTTTCAACTCCACACGGTACATTAGAAAC
CGAGGTAAAAGAACTGCTTGTCATAAGAAAGATAATG
180041
180042
CTTTCAACTCCACACGGTACATTAGAAAC
GATATCTTTTTCAAAACAGATGAGAAATACCAACAT
180106
180107
CTTTCAACTCCACACGGTACATTAGAAAC
180135
Left flanking sequence : Till position 177442 (length
bp)
TTCTTAATGGAGGATCTGACGATAATCATTACAAGGCAGAGATAGAGAGGCCCCAGAGGATAATAGGCAA
ACAGACCATACAGATAGAGATATTAAAAAC
Right flanking sequence : From position 180135 (length
bp)
CCTAACTCTTCATATTAATCTTATCCTACAGAATCAATAACTTTAGAGAGGGGGTACCCTTCGCAAAATG
AAGTTTATTTTCGGAAACTCCAGGTGTCTC
Print the CRISPR sequence : From position
bp To position
bp