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CRISPRs details
NC_013894_6
Flanking alignement tool
Page manual
  
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NC_013894_6                                                                                                                 
top
Strain :
Thermocrinis albus DSM 14484
RefSeq :
NC_013894 (chromosome circular)
CRISPR id :
NC_013894_6
DR consensus (29 bp) :
CTTTCAACTCCACACGGTACATTAGAAAC
Number of repetitions :
61
Begin Position :
1496455
End Position :
1500535
1496455
CTTTCAACTCCACACGGTACATTAGAAAC
ACTATCCTGAACTTCTCACACAGTATGCAAAACAGCG
1496520
1496521
CTTTCAACTCCACACGGTACATTAGAAAC
TGCTGGACAAGGCACTGGCAAGGATGAGACAAAGAT
1496585
1496586
CTTTCAACTCCACACGGTACATTAGAAAC
TACTTATCAAGCGTTTCCTTGATAGCTTTTTTGACGTAG
1496653
1496654
CTTTCAACTCCACACGGTACATTAGAAAC
TATCAATGACTTGAGGGCTGACACCACCTTCTTTTTT
1496719
1496720
CTTTCAACTCCACACGGTACATTAGAAAC
GTGGTAGAGAAAGAGGTCTCTTTGTAGCAATTGATTGCA
1496787
1496788
CTTTCAACTCCACACGGTACATTAGAAAC
TACTTATCAAGCGTTTCCTTGATAGCTTTTTTGACGTAG
1496855
1496856
CTTTCAACTCCACACGGTACATTAGAAAC
GGGAACGAGGGTGGAGCTTGGTAGCATAGTACAAGAGA
1496922
1496923
CTTTCAACTCCACACGGTACATTAGAAAC
CCGCCATTACCCATTTTGGGAAGTGATGGCGGAAGCAA
1496989
1496990
CTTTCAACTCCACACGGTACATTAGAAAC
GAGATAATGCAGATTGTTTTACAGTACAATGAGCAAC
1497055
1497056
CTTTCAACTCCACACGGTACATTAGAAAC
CCTTGAGGAGCTAATCAGGGAAGAGCTTGGTCCGATGGGGGT
1497126
1497127
CTTTCAACTCCACACGGTACATTAGAAAC
TATCCCATCTCCCCAGCTATCTTTTCAAGCACAGCAAA
1497193
1497194
CTTTCAACTCCACACGGTACATTAGAAAC
CATTAGCTTTTTCATGCCTAAGTCATTAAAAGAGGAGC
1497260
1497261
CTTTCAACTCCACACGGTACATTAGAAAC
GCCAGTATGCATATATAATGTGTAGGAAAATACCTA
1497325
1497326
CTTTCAACTCCACACGGTACATTAGAAAC
ACGAGTCCACCGCCAGAGTATTAAGTACATTGTTGGGGA
1497393
1497394
CTTTCAACTCCACACGGTACATTAGAAAC
AAAGATACAAAGCCCCGCCAGTAGCTATGCAAACATA
1497459
1497460
CTTTCAACTCCACACGGTACATTAGAAAC
AGAAAATTACGGAAATGGAGAATGATCCAAAACTCATG
1497526
1497527
CTTTCAACTCCACACGGTACATTAGAAAC
CCACACGGTACATTAGAAACGTCCGAGATCCTCTTTGAAGAAGTGTTGTATCTCCTGCG
1497614
1497615
CTTTCAACTCCACACGGTACATTAGAAAC
AAAAAGGAAGAAGGGATAATAGTTGGTAGCGTGGACATAA
1497683
1497684
CTTTCAACTCCACACGGTACATTAGAAAC
TTGTCTCACCCCACGGAGATGTGATAGGATCAGCATC
1497749
1497750
CTTTCAACTCCACACGGTACATTAGAAAC
TCACCAAACACCTTAATCCCAAAAGCTTCATAGAGTTTC
1497817
1497818
CTTTCAACTCCACACGGTACATTAGAAAC
ACTTAGGAGTGGCATGCCTGCCTGATAGGTCTTGCCATATT
1497887
1497888
CTTTCAACTCCACACGGTACATTAGAAAC
GCAACGCCTTCCCGCTTTTTACAAAAGCAAAAAACCAAA
1497955
1497956
CTTTCAACTCCACACGGTACATTAGAAAC
GCTGAGGAAGCACTCGTGGATGAGGATAACAGCATAG
1498021
1498022
CTTTCAACTCCACACGGTACATTAGAAAC
ATAGTGAAAAAGAGGCTCCCTTCATTCAATCTCCACCAACG
1498091
1498092
CTTTCAACTCCACACGGTACATTAGAAAC
TCATAAACCGCCCCAGTTTGCACTGCTATCCTCAG
1498155
1498156
CTTTCAACTCCACACGGTACATTAGAAAC
GACCCCTCAGTTCTTGCCTCACTTCCTCAATGCTGGA
1498221
1498222
CTTTCAACTCCACACGGTACATTAGAAAC
CTTGTTATCTCATGAGTTTCCCCTATCTTCACAATG
1498286
1498287
CTTTCAACTCCACACGGTACATTAGAAAC
ATCCCTATACACCACTAACAGCTTTTGTGGTTTAGTAGAGAA
1498357
1498358
CTTTCAACTCCACACGGTACATTAGAAAC
GGGTAGTGCGGAAAGGCTTGAGAAGAAGTTTTTAAGA
1498423
1498424
CTTTCAACTCCACACGGTACATTAGAAAC
AGACAGGAGGTGAGAGAAATGAAGAAGTTCATTTTAA
1498489
1498490
CTTTCAACTCCACACGGTACATTAGAAAC
CTGAAAGGGAAGATTGACCCCCACTCCTAAGGCACT
1498554
1498555
CTTTCAACTCCACACGGTACATTAGAAAC
TAATTCCACTATCAGAATGGTTCTTGAAGAAGTTCAA
1498620
1498621
CTTTCAACTCCACACGGTACATTAGAAAC
TGAAGGAAGAGAAGGAAGTTATACCTTCCATTTTTA
1498685
1498686
CTTTCAACTCCACACGGTACATTAGAAAC
TTGAGTAGCCCCTTTGCTTGCATACTCTCGTTAGCCTGCC
1498754
1498755
CTTTCAACTCCACACGGTACATTAGAAAC
AAAACAAGTTCTACGAGCTTTACAGTGATGCTAAGAG
1498820
1498821
CTTTCAACTCCACACGGTACATTAGAAAC
TTTTTCAACAAACTACTTGTATTTGTCTCAGTATCATG
1498887
1498888
CTTTCAACTCCACACGGTACATTAGAAAC
TGAAAAGTAGTTCTGCTTTCATTACAAAAAAACTTTTAAA
1498956
1498957
CTTTCAACTCCACACGGTACATTAGAAAC
AAATCAAGTAGCAATTAAAAAAATCCAAATCCAATAAAA
1499024
1499025
CTTTCAACTCCACACGGTACATTAGAAAC
TATCGCTGAACACCTCTCCAGTTAGAGTGCATCTGAAG
1499091
1499092
CTTTCAACTCCACACGGTACATTAGAAAC
TTCAAGTATTTACAGAGAGATGCAGGATATCTCTTAG
1499157
1499158
CTTTCAACTCCACACGGTACATTAGAAAC
CCTTGGAGGGTCAGAAAGGTTTGATGCATAACAAGTATG
1499225
1499226
CTTTCAACTCCACACGGTACATTAGAAAC
TCCTGTGAGGGATGTAGAGGTGGAAAGTAAAGACTTTTCAA
1499295
1499296
CTTTCAACTCCACACGGTACATTAGAAAC
AAGGGATTGAAACTGAAAAATCCGCCACCACAGAACA
1499361
1499362
CTTTCAACTCCACACGGTACATTAGAAAC
ATGCTTGGAAAGGCTCTGAAAGAAGGAACTCTCACAA
1499427
1499428
CTTTCAACTCCACACGGTACATTAGAAAC
GAAGATGGGCTAAATGTTTTCGTGGATACTGCAGAAAA
1499494
1499495
CTTTCAACTCCACACGGTACATTAGAAAC
TCTGTTCCTGTCAGTCCTTCCTCTTTCTCTGATACGTCAG
1499563
1499564
CTTTCAACTCCACACGGTACATTAGAAAC
TGTTGTAGGGGTGGCGGGTTCTGTCTGTTGTTGCG
1499627
1499628
CTTTCAACTCCACACGGTACATTAGAAAC
CTGAATTCTGTACCTTTCCAACTTTTTTCTGTTGTTC
1499693
1499694
CTTTCAACTCCACACGGTACATTAGAAAC
AATCTCAGTGTTTGCTGGTACATCCGCCCCGAACGGAAAACT
1499764
1499765
CTTTCAACTCCACACGGTACATTAGAAAC
GGGCAAAGGAAGGAAGCGTAAAATAGTTAAAAAACTTCAAA
1499834
1499835
CTTTCAACTCCACACGGTACATTAGAAAC
GTGGTTGAAGTATCTGCTGGAAGAAGGGTGACGATACTGA
1499903
1499904
CTTTCAACTCCACACGGTACATTAGAAAC
CAGAGTGATGTCACACAAGATGTGAGACTTGTTGCATC
1499970
1499971
CTTTCAACTCCACACGGTACATTAGAAAC
TGAAGCTGATGAGGAATGCATCAAAGAAAATTTCAGGA
1500037
1500038
CTTTCAACTCCACACGGTACATTAGAAAC
ACTCTCTCCACCGCATCAGCACCACCTGTGTCCTCTG
1500103
1500104
CTTTCAACTCCACACGGTACATTAGAAAC
CACGGAAAAACCGCACCGCACCGAAAAAGGTTAGGAAG
1500170
1500171
CTTTCAACTCCACACGGTACATTAGAAAC
CATGTATCTTTTCCACCGCACAGTTTCCAGAGACTCA
1500236
1500237
CTTTCAACTCCACACGGTACATTAGAAAC
TTGCGAATTTGTCCGCTTACGCGGACCGAACCTTTAAG
1500303
1500304
CTTTCAACTCCACACGGTACATTAGAAAC
AATGATTTTGTTTCGTTGTATACGCGTGTCTTCAATGA
1500370
1500371
CTTTCAACTCCACACGGTACATTAGAAAC
GGATACAAGGTACAAGATAGTACAGGTTGCAATAGAGCT
1500438
1500439
CTTTCAACTCCACACGGTACATTAGAAAC
TGTAGTCTGTACTTCTTTAATAACCTGTTCTATTGATGC
1500506
1500507
CTTTCAACTCCACACGGTACATTAGAAAC
1500535
Left flanking sequence : Till position 1496455 (length
bp)
TTTCTTGAGTCTGACAAGAGGGGAGCTTCTTAATGGAGGATCTAGAGATAGAGAGTCTCCACAGGATAAT
AGGCAAACAGGCCATAGAGATATTAAAAAC
Right flanking sequence : From position 1500535 (length
bp)
TGTCGTCAGGTACGAAGAAACAAGTGTTATAGATGATACTTT
Print the CRISPR sequence : From position
bp To position
bp