Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_013960_2                                                                                                                 top


Strain : Nitrosococcus halophilus Nc4 RefSeq :NC_013960 (chromosome circular)
CRISPR id : NC_013960_2
DR consensus (28 bp) : GTTCGCCGCCGCGTAGGCGGTTTAGAAANumber of repetitions :32
Begin Position : 1192984 End Position : 1194875

1192984GTTCGCCGCCGCGTAGGCGGTTTAGAAATCCAGGCTTTCCATAAATCTCTTAACAGCCGT 1193043
1193044GTTCGCCGCCGCGTAGGCGGTTTAGAAAATACTTACAAACTTTGAATGTACATCTCCTAAT 1193104
1193105GTTCGCCGCCGCGTAGGCGGTTTAGAAAATGCTGGAAAAGGAAGATCCACGTACCCCGCAA 1193165
1193166GTTCGCCGCCGCGTAGGCGGTTTAGAAAATCGTCGTTGCGGTAGAGGAGAAACTGATGCC 1193225
1193226GTTCGCCGCCGCGTAGGCGGTTTAGAAATACAAAAAATGATAGGTAGGTGGAGTCTTGCT 1193285
1193286GTTCGCCGCCGCGTAGGCGGTTTAGAAAATCCTCCTGGGTTTCGTAGCGGCCATGCTTAC 1193345
1193346GTTCGCCGCCGCGTAGGCGGTTTAGAAAAAAAGTTTAAGCATCCCCTCAGACATTTTCCT 1193405
1193406GTTCGCCGCCGCGTAGGCGGTTTAGAAAACTCGGGTGGAAAAGTGCTTCCCGGTAATTCC 1193465
1193466GTTCGCCGCCGCGTAGGCGGTTTAGAAAACAAAGACCGGGCGTTATGGCTGACCAAGCGA 1193525
1193526GTTCGCCGCCGCGTAGGCGGTTTAGAAAAAAGATCTATTCATAGACACAGATCATAAGTT 1193585
1193586GTTCGCCGCCGCGTAGGCGGTTTAGAAAACCCGACCCTCGCCGCTTCATCGTATGCGGTC 1193645
1193646GTTCGCCGCCGCGTAGGCGGTTTAGAAACTATGAATAACACACCACTGCGATTCAATTCC 1193705
1193706GTTCGCCGCCGCGTAGGCGGTTTAGAAATGATGCGGTCCGAAGGAGGGCAGTGCCTAGGG 1193765
1193766GTTCGCCGCCGCGTAGGCGGTTTAGAAAACGTGTTTAATAACCCCGTAGTTCGTAGTGGG 1193825
1193826GTTCGCCGCCGCGTAGGCGGTTTAGAAAACCCGACCCTCGCCGCTTCATCGTATGCGGTC 1193885
1193886GTTCGCCGCCGCGTAGGCGGTTTAGAAACTATGAATAACACACCACTGCGATTCAATTCC 1193945
1193946GTTCGCCGCCGCGTAGGCGGTTTAGAAATATCGGATAGGACACGGGAGTCCTACTAACTA 1194005
1194006GTTCGCCGCCGCGTAGGCGGTTTAGAAATGAAGATATTTATGGGGATGAGATAGTTTAAG 1194065
1194066GTTCGCCGCCGCGTAGGCGGTTTAGAAAACCCGACCCTCGCCGCTTCATCGTATGCGGTC 1194125
1194126GTTCGCCGCCGCGTAGGCGGTTTAGAAACTATGAATAACACACCACTGCGATTCAATTCC 1194185
1194186GTTCGCCGCCGCGTAGGCGGTTTAGAAACGAAATTGCGGAAGTCAGCGTGATAGCGTTAA 1194245
1194246GTTCGCCGCCGCGTAGGCGGTTTAGAAATCCTGCCACGGCAATAAGTCCCATCTTGGCTT 1194305
1194306GTTCGCCGCCGCGTAGGCGGTTTAGAAATTCCACAAATCTCTAAGTAACCGCTTCTCCGT 1194365
1194366GTTCGCCGCCGCGTAGGCGGTTTAGAAAATACCGAACACGACGATCTCAGGCCGGATGGA 1194425
1194426GTTCGCCGCCGCGTAGGCGGTTTAGAAAACAGGGGTCTAACCCTATAAGAATCAATATATA 1194486
1194487GTTCGCCGCCGCGTAGGCGGTTTAGAAATTTAGCGATGAAAATAGGTGTTCCGGTGCCGC 1194546
1194547GTTCGCCGCCGCGTAGGCGGTTTAGAAATTGCGTATATTTGGGAGCAAGAGCTGTCTAAT 1194606
1194607GTTCGCCGCCGCGTAGGCGGTTTAGAAATAAAAGATTGCCAATAACTATTCCATCTCTAG 1194666
1194667GTTCGCCGCCGCGTAGGCGGTTTAGAAACTCCTGAATTCATTATTTCTAATTTTTCAGATC 1194727
1194728GTTCGCCGCCGCGTAGGCGGTTTAGAAAAGGGGTATCAAAAGATATCTATTTGAATTTCC 1194787
1194788GTTCGCCGCCGCGTAGGCGGTTTAGAAATGACAGCGGATTGACGCATTTATCCCATGCAG 1194847
1194848GTTCGCCGCCGCGTAGGCGGTTTAGAAA1194875
Left flanking sequence : Till position 1192984 (length bp)
AATAACAAATAGTTAGCTTAGTTTAAGAAAATGGAAGGTTTTAGGCTAATGCTCAACGTAAGTCTCTGTG
GTTATTGTGTTTTTTTAGCTTTAAGTTACT
Right flanking sequence : From position 1194875 (length bp)
AAACACGAAAGCGTTACTTATAGCAAGGTCTTTCGTTACTCCAGTTCTCCTTAACAACACTTTCCCCATG
CAGTGGGAAAGAGTAAAGAATACCAATTTG

Print the CRISPR sequence : From position bp To position bp