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CRISPRs details
NC_014106_2
Flanking alignement tool
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NC_014106_2                                                                                                                 
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Strain :
Lactobacillus crispatus ST1
RefSeq :
NC_014106 (chromosome circular)
CRISPR id :
NC_014106_2
DR consensus (29 bp) :
AGGATCACCTCCACATACGTGGAGAATAC
Number of repetitions :
15
Begin Position :
1226847
End Position :
1227730
1226847
AGGATCACCTCCACATACGTGGAGAATAC
ATCCTCGTACGCTGTTATCTTCTACGCACTTA
1226907
1226908
AGGATCACCTCCACATACGTGGAGAATAC
GGATTAACTGCAGTCAAGGCCAATTCTTTAGA
1226968
1226969
AGGATCACCTCCACATACGTGGAGAATAC
TTTTGTCATCAACATTAAAATAAATGAGTTTA
1227029
1227030
AGGATCACCTCCACATACGTGGAGAATAC
GAACCCGTTGTCCCACCTAATGCGTTGAATTC
1227090
1227091
AGGATCACCTCCACATACGTGGAGAATAC
ATGCTCCAATCGATCGTTTGACTGATAATCAAC
1227152
1227153
AGGATCACCTCCACATACGTGGAGAATAC
GTAGCAACTGCCCCAACGAGAGCACTGTCCAT
1227213
1227214
GGGATCACCTCCACATACGTGGAGAATAC
TCTTTATCAACCAAATTTAACGTTTGAGCATT
1227274
1227275
GGGATCACCTCCACATACGTGGAGAATAC
AGAATGCTGTCGCAAAAGCCAAGGCGTACGGT
1227335
1227336
AGGATCACCTCCACATACGTGGAGAATAC
AAATGTTGTTGGACCAGCAGCACCCCAAACAT
1227396
1227397
AGGATCACCTCCACATACGTGGAGAATAC
AAAGGCACTTCAGTAGGATATGCCCAAAGAGC
1227457
1227458
AGGATCACCTCCACATACGTGGAGAATAC
AGCACAAGGTACATCAAGACCGATGAACGGTA
1227518
1227519
AGGATCACCTCCACATACGTGGAGAATAC
CAGGTCAGTATGAATGGTTGCAAATTTGTGAT
1227579
1227580
AGGATCACCTCCACATACGTGGAGAATAC
TTTCTTTGCGTCAAAACTTGATTGTCCTCATC
1227640
1227641
AGGATCACCTCCACATACGTGGAGAATAC
AATGATGATTGGGGCAGTGATGAAACTGGCAC
1227701
1227702
AGGATCACCTCCACATACGTGGAGAATAC
1227730
Left flanking sequence : Till position 1226847 (length
bp)
CCAGCGTTTATAGGCTATTTATCTGTGCGCTCAAGGACAGTAACACTCTCAACATGTGTGGAGAATACAG
CATTCCCATATTTCTCATTCACTGCACCAA
Right flanking sequence : From position 1227730 (length
bp)
AGTAAACAAATCCCTTTATAGCGCCAAATGAAAATACGCAAACACCATTTTTTCATCACTTTGATCCTAC
TACCAAGTATATCGATTTTTATTAAATAGA
Print the CRISPR sequence : From position
bp To position
bp