Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014122_4                                                                                                                 top


Strain : Methanocaldococcus infernus ME RefSeq :NC_014122 (chromosome circular)
CRISPR id : NC_014122_4
DR consensus (37 bp) : GTTTCCATCCTTGTTTTAATGGACTGGCGATTCAAACNumber of repetitions :11
Begin Position : 531383 End Position : 532158

531383GTTTCCATCCTTGTTTTAATGGACTGGCGATTCAAACAGGGTGAAACCAGTTGCTGGAATGTTCGACTATGACAT 531457
531458GTTTCCATCCTTGTTTTAATGGACTGGCGATTCAAACCTAAGCTCTCTTCTCTCTAACTTGAGAAATAAAGC 531529
531530GTTTCCATCCTTGTTTTAATGGACTGGCGATTCAAACGTGATAGAAACATCTTTTTTATGAATTGTTTGATTGTA 531604
531605GTTTCCATCCTTGTTTTAATGGACTGGCGATTCAAACCATTTTGGAGCCATAGGGATAATATGGAGCTTACAA 531677
531678GTTTCCATCCTTGTTTTAATGGACTGGCGATTCAAACATGAAGATTGGCAAATGATTAGGCTATTATTCAAGG 531750
531751GTTTCCATCCTTGTTTTAATGGACTGGCGATTCAAACTGTTCCAAACACAGATGAGTGGTTAGATTGGGCTATCA 531825
531826GTTTCCATCCTTGTTTTAATGGACTGGCGATTCAAACGAAAATCTCTTAAAATACTTAATGAAAATGAAAATCT 531899
531900GTTTCCATCCTTGTTTTAATGGACTGGCGATTCAAACACACAACAACTTTACGACTTCCTGAAGTGTTTACA 531971
531972GTTTCCATCCTTGTTTTAATGGACTGGCGATTCAAACAGTGCAGATGAAATACAAACTAGAAGAAAACCATTGAAGA 532048
532049GTTTCCATCCTTGTTTTAATGGACTGGCGATTCAAACTTTTAGACAAACTAAAGAAATGGGGGCTAATAGAAA 532121
532122GTTTCCATCCTTGTTTTAATGGACTGGCGATTCAAAC532158
Left flanking sequence : Till position 531383 (length bp)
CACCATCTTTTTTAAAGCTTTATTAGGCTTTTATGTAGTATAAGTTTTTTTATTGGTTTATTTTTATGTA
TGGATTTTAGGTTAAATAAAAATAATATTA
Right flanking sequence : From position 532158 (length bp)
CCTTAATGTCTGCTCTTATTTTATATCGAAACTCCTATAAAAAACTTTCTTTTTTAACCTGAGTTTTCTT
ACTGGTTGATTATTGAACCCCTATATAAAA
Print the CRISPR sequence : From position bp To position bp