Institut de Génétique et Microbiologie

CRISPR details


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Université Paris Sud

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NC_014152_2                                                                                                                 top


Strain : Thermincola sp. JR RefSeq :NC_014152 (chromosome circular)
CRISPR id : NC_014152_2
DR consensus (32 bp) : GTTTCAATCCACGCACCCGCATGGGGTGCGACNumber of repetitions :98
Begin Position : 1952690 End Position : 1959253

1952690GTTTCAATCCACGCACCCGCATGGGGTGCGACGTGGATCAGGTGTCTGGAGTGCGGGAGGGAAATG 1952755
1952756GTTTCAATCCACGCACCCGCATGGGGTGCGACCCCCGTGATTTTTCCCATTTTTGGCTGTTTTATTAG 1952823
1952824GTTTCAATCCACGCACCCGCATGGGGTGCGACTGCAGATATGCGTTGATGAGCAGGCCGGCTATACA 1952890
1952891GTTTCAATCCACGCACCCGCATGGGGTGCGACACGAATAGACATAATTGAAGCGGCACCAGTGCTAGAT 1952959
1952960GTTTCAATCCACGCACCCGCATGGGGTGCGACTTTTCGGGCCAAAAAATGCTATAGAATGATAGTGTA 1953027
1953028GTTTCAATCCACGCACCCGCATGGGGTGCGACTAACATAAACGGTCTAACTTTTGCTGAATTACCA 1953093
1953094GTTTCAATCCACGCACCCGCATGGGGTGCGACCCGGTCACAGTCAATGGCGCTGACTATGATACCAT 1953160
1953161GTTTCAATCCACGCACCCGCATGGGGTGCGACCGCGACCAGTCTTCCGGAGGATTATGTCCGGATTGG 1953228
1953229GTTTCAATCCACGCACCCGCATGGGGTGCGACGGGCCAGCGACCTCCGCAGTTTCTACGCTTGTCTCCT 1953297
1953298GTTTCAATCCACGCACCCGCATGGGGTGCGACGGATATAACGAACCAATCGCCCCGACCTATCACGT 1953364
1953365GTTTCAATCCACGCACCCGCATGGGGTGCGACTTAGCAAAGGCTATTGCAAATTCATATGGTTCGAA 1953431
1953432GTTTCAATCCACGCACCCGCATGGGGTGCGACGGGCGCTTATCTCGAAATACGGCATTATGAGCGTT 1953498
1953499GTTTCAATCCACGCACCCGCATGGGGTGCGACTTGAATACGTACATTATTAAAAAAACAACAATACCAG 1953567
1953568GTTTCAATCCACGCACCCGCATGGGGTGCGACGGGGTTGTAAGAGGAATACCGAATAATCATGTAACA 1953635
1953636GTTTCAATCCACGCACCCGCATGGGGTGCGACTGCCATTACAGTCTGGTATATTTACAGGTATATTTT 1953703
1953704GTTTCAATCCACGCACCCGCATGGGGTGCGACATAAAAGTAAAAACAAAGAAGTTGTATTCTGTTGGT 1953771
1953772GTTTCAATCCACGCACCCGCATGGGGTGCGACGCCGGCATTTTACAGTGTACACAAAGACATAAAAGA 1953839
1953840GTTTCAATCCACGCACCCGCATGGGGTGCGACGCAACTTACGTACATTCCCACCGGTCAGAAGAT 1953904
1953905GTTTCAATCCACGCACCCGCATGGGGTGCGACGCGACCTGCTTGTTTATTATCTTTGCCCTGCTCT 1953970
1953971GTTTCAATCCACGCACCCGCATGGGGTGCGACCTACTCTCGAAGCCAAACTGAACGCTGTTGAGCAG 1954037
1954038GTTTCAATCCACGCACCCGCATGGGGTGCGACCTGGTCAGTATACAATAGTAGACGGGAGTTTACA 1954103
1954104GTTTCAATCCACGCACCCGCATGGGGTGCGACGGAGAACGTATCTGTTTATTCCCGCGACAGTGTAC 1954170
1954171GTTTCAATCCACGCACCCGCATGGGGTGCGACGTTAAATCGTCGTTCATATACACATTTTCTGCATG 1954237
1954238GTTTCAATCCACGCACCCGCATGGGGTGCGACTAGTACTGCTCACAAACAGACGACTGCAGCAGATG 1954304
1954305GTTTCAATCCACGCACCCGCATGGGGTGCGACTTACCTTCTCCTTTAGGTTTTAATAGGTTTCAAAAT 1954372
1954373GTTTCAATCCACGCACCCGCATGGGGTGCGACCTTTCATAAGTGACCATCTCCTTAGGTTTTTTAGAA 1954440
1954441GTTTCAATCCACGCACCCGCATGGGGTGCGACATTACGAATATTTTTAATCTGACTACTTGTCAACCAA 1954509
1954510GTTTCAATCCACGCACCCGCATGGGGTGCGACAACATAATCCCTCCTTAATTTTAAAAGTTTCATAA 1954576
1954577GTTTCAATCCACGCACCCGCATGGGGTGCGACTTGTGTTCGCTAGTGACGTTCAAAAAGTCACCAAT 1954643
1954644GTTTCAATCCACGCACCCGCATGGGGTGCGACTGAATTCTGTCTTCGACTTGGGCATGATTAGCAG 1954709
1954710GTTTCAATCCACGCACCCGCATGGGGTGCGACCGTTGAAGGATAAAACCAATTTTAAAGGAGGAAG 1954775
1954776GTTTCAATCCACGCACCCGCATGGGGTGCGACTGTATATTCGTAATATCCTTTTGCAAAAAGTTCTTT 1954843
1954844GTTTCAATCCACGCACCCGCATGGGGTGCGACAATCCAGCACCAAAAAATTCAATAATATCATCAGTT 1954911
1954912GTTTCAATCCACGCACCCGCATGGGGTGCGACTTTAACATGGGTATTAAATTTAATTGATATACTTGAA 1954980
1954981GTTTCAATCCACGCACCCGCATGGGGTGCGACGTTGCCTGCTGCCCGGATGTTTCAGCGCATACAG 1955046
1955047GTTTCAATCCACGCACCCGCATGGGGTGCGACGGTAATCATGCGTAAAGTCAAAATCACAGAGACCCT 1955114
1955115GTTTCAATCCACGCACCCGCATGGGGTGCGACAAATTCAGTATGTTTCTTCATCTCGCCACACATG 1955180
1955181GTTTCAATCCACGCACCCGCATGGGGTGCGACCCCCGTGATTTTTCCCATTTTTGGCTGTTTTATTAG 1955248
1955249GTTTCAATCCACGCACCCGCATGGGGTGCGACGACATGGACACCTGCCGGGGAGAACAGTGGGAAAAA 1955316
1955317GTTTCAATCCACGCACCCGCATGGGGTGCGACGAGCGGGAAGGGGTGAGGAATGAATGGTAGCAGAA 1955383
1955384GTTTCAATCCACGCACCCGCATGGGGTGCGACAGTATCTATAAAATCACTAGTCAAACTATCAAAAACA 1955452
1955453GTTTCAATCCACGCACCCGCATGGGGTGCGACGCAGATGGGTCAATTACTCTTGCAAAGCTTAATCCG 1955520
1955521GTTTCAATCCACGCACCCGCATGGGGTGCGACTTTTTTTGTAGTTTTTTTCTAGTAGAAAAATTTTTCC 1955589
1955590GTTTCAATCCACGCACCCGCATGGGGTGCGACGCTTAGCTTCGCTTGCGAACCCTTTTTTGGCCTC 1955655
1955656GTTTCAATCCACGCACCCGCATGGGGTGCGACATTTGGGGGGTGGTTAGTTGTTTGTTCAGCTTAA 1955721
1955722GTTTCAATCCACGCACCCGCATGGGGTGCGACAGCCTGGGCAAAGGTAAAAATTTGAGCCACTATTTAA 1955790
1955791GTTTCAATCCACGCACCCGCATGGGGTGCGACATTGCTGTGATTTTTGCAAGTATCACAAATGACAG 1955857
1955858GTTTCAATCCACGCACCCGCATGGGGTGCGACGTTTAGTTTGGTTATGTTGCAAGGCTAAGGTTTTACG 1955926
1955927GTTTCAATCCACGCACCCGCATGGGGTGCGACCATTACCTGCCGGAACAGTCCGGCAGGTTGTGCAG 1955993
1955994GTTTCAATCCACGCACCCGCATGGGGTGCGACAATTCGGATACTGTGACACGGACGCTGATGTCTC 1956059
1956060GTTTCAATCCACGCACCCGCATGGGGTGCGACTGTTCCTAGGGCAGGAGGGATAACAGGGCAGGCATA 1956127
1956128GTTTCAATCCACGCACCCGCATGGGGTGCGACAAACAAAAGCATCTGATGTGGCGAAGAAAATAGTA 1956194
1956195GTTTCAATCCACGCACCCGCATGGGGTGCGACTGTCACGCCACCGGCCCGGCTGCCGGTTCTTCAACCA 1956263
1956264GTTTCAATCCACGCACCCGCATGGGGTGCGACTAGTAGCAAAAGATGATGTGCAAGCTGCGGCATTTAA 1956332
1956333GTTTCAATCCACGCACCCGCATGGGGTGCGACCCTGCGAGAGACGAAACCAGAAGCATATGAGCAT 1956398
1956399GTTTCAATCCACGCACCCGCATGGGGTGCGACAGGACAATCTGTATTGCCACAAATGATGATTTTGTT 1956466
1956467GTTTCAATCCACGCACCCGCATGGGGTGCGACAAAAGAAAAAGTAAATTATACCATCGAATTAGCTG 1956533
1956534GTTTCAATCCACGCACCCGCATGGGGTGCGACATTTTTTACCTTTTATGTTCCATGCAGCCAAAATG 1956600
1956601GTTTCAATCCACGCACCCGCATGGGGTGCGACACGGATTGTGCCGGTCAAAAAAGGCCCGGATTCGGTG 1956669
1956670GTTTCAATCCACGCACCCGCATGGGGTGCGACTTCTCACCCCGAGGACAAAATATTTCAGCACGAAGGC 1956738
1956739GTTTCAATCCACGCACCCGCATGGGGTGCGACAGCCAAACTATGCACTTCGTCCCGCCATTCGCTGTA 1956806
1956807GTTTCAATCCACGCACCCGCATGGGGTGCGACGTTTGCGCCTGTTTCAAAAACTTCTTCCATCAT 1956871
1956872GTTTCAATCCACGCACCCGCATGGGGTGCGACCTATGTCAAAGTCTGCTACTAACACAAGGTTATCG 1956938
1956939GTTTCAATCCACGCACCCGCATGGGGTGCGACGTTTGCGCCTGTTTCAAAAACTTCTTCCATCAT 1957003
1957004GTTTCAATCCACGCACCCGCATGGGGTGCGACTCTTCCATTCATAGACCGTGTCCGTATTCACATC 1957069
1957070GTTTCAATCCACGCACCCGCATGGGGTGCGACGTATGGCATGAATACCTTCGCCCGTTTGTGGATG 1957135
1957136GTTTCAATCCACGCACCCGCATGGGGTGCGACTATGAGATACCGGAAGCGCTTGGCATGATAATTAA 1957202
1957203GTTTCAATCCACGCACCCGCATGGGGTGCGACGCAGACGTTGCTTTTGTTGACGACGAATTCAAGC 1957268
1957269GTTTCAATCCACGCACCCGCATGGGGTGCGACGACCCAATGCGAAGGCATGAGGTTAGCAGTAGGG 1957334
1957335GTTTCAATCCACGCACCCGCATGGGGTGCGACGGCGCGACTTGCTTGTTTATTATCTTTGCCCTGCTCTG 1957404
1957405GTTTCAATCCACGCACCCGCATGGGGTGCGACGACTTTTCCGTCACCGCCGAAGCGCTGCAGGAAGTAG 1957473
1957474GTTTCAATCCACGCACCCGCATGGGGTGCGACGGAATTGGTGGATTTCAGTTTACTGCATCACGATT 1957540
1957541GTTTCAATCCACGCACCCGCATGGGGTGCGACAACGGTCTATTTTGCCTTGTATTCGACGATAAC 1957605
1957606GTTTCAATCCACGCACCCGCATGGGGTGCGACAATTGTAAAAATTGACAATGAATGGAAGGTAAAAG 1957672
1957673GTTTCAATCCACGCACCCGCATGGGGTGCGACTAAACTGATAATAGCGTTGTTTACAGTAGCATTA 1957738
1957739GTTTCAATCCACGCACCCGCATGGGGTGCGACTATTCGCATTATCTACTACTGTAATATTGACTTC 1957804
1957805GTTTCAATCCACGCACCCGCATGGGGTGCGACAGACCAAGAAGCGCCTTTTGCTTGGGGGGGATGT 1957870
1957871GTTTCAATCCACGCACCCGCATGGGGTGCGACTTAATCCATGGTAAATGGTTTGGTTGACTAATAT 1957936
1957937GTTTCAATCCACGCACCCGCATGGGGTGCGACAACCCTTATTTTGGCGTAAATCCGTTAGACGTTTA 1958003
1958004GTTTCAATCCACGCACCCGCATGGGGTGCGACATCACAGTTATTGACCCATATCCTGAATGGTCAGG 1958070
1958071GTTTCAATCCACGCACCCGCATGGGGTGCGACATGGGCCTGCATCAATATGGTAAGCGTACAAATAA 1958137
1958138GTTTCAATCCACGCACCCGCATGGGGTGCGACCTTTTTTATTGATAATCGTTATTAAGTTGTCAAA 1958203
1958204GTTTCAATCCACGCACCCGCATGGGGTGCGACGCGTTTGCGGGGGTCCTGCCGGGTGTAGTGCCCCG 1958270
1958271GTTTCAATCCACGCACCCGCATGGGGTGCGACAACAAGCTTTTAACACAGCTTACCGGACCAACCTT 1958337
1958338GTTTCAATCCACGCACCCGCATGGGGTGCGACGTCTAACCAGGATATGACCACCGGTTTTTATTTCCGT 1958406
1958407GTTTCAATCCACGCACCCGCATGGGGTGCGACGACCAACCCCGCCGGCTAAATCGGAAGCCATCTTGGT 1958475
1958476GTTTCAATCCACGCACCCGCATGGGGTGCGACAGGGGGACCCGGATTTAAGTGGCATCATATCAAAGCTT 1958545
1958546GTTTCAATCCACGCACCCGCATGGGGTGCGACATGGAAGGTGGTTTGGAAGATGAGATTGCTTAATTT 1958613
1958614GTTTCAATCCACGCACCCGCATGGGGTGCGACTAACAATTTTCTTTTCACCGTCAATTGTACAAGCTG 1958681
1958682GTTTCAATCCACGCACCCGCATGGGGTGCGACGGTAAATGCTTATTATGATACAAGTACAGGACAATG 1958749
1958750GTTTCAATCCACGCACCCGCATGGGGTGCGACTTAATGTCACTTTTGCTTTTTGAGCCTCAAGTCTA 1958816
1958817GTTTCAATCCACGCACCCGCATGGGGTGCGACACCCGGAGAGATTGGATGAGCCGTTGAAGTGGAA 1958882
1958883GTTTCAATCCACGCACCCGCATGGGGTGCGACGGACGGCCAAGCTATCCGGACGGAGTTACTGAGGAA 1958950
1958951GTTTCAATCCACGCACCCGCATGGGGTGCGACTTTATCGTTTTGGCGGTTGCTCTTTTTATCTTCCG 1959017
1959018GTTTCAATCCACGCACCCGCATGGGGTGCGACTCTTCCTCCGTGGTTAAAAGAAACAGTGGGAAAGAA 1959085
1959086GTTTCAATCCACGCACCCGCATGGGGTGCGACTGGCTCCACCGACAGATTTCATATATGCCTTTAGCT 1959153
1959154GTTTCAATCCACGCACCCGCATGGGGTGCGACTGCTCTGGATAGTTATTTTCTTAACACAAATAACAT 1959221
1959222GTTTCAATCCACGCACCCGCATGGGGTGCGAC1959253
Left flanking sequence : Till position 1952690 (length bp)
CTTGACAACCGCCACTGTCGGTTATCAAACTGCCGCCAAATAATGTGGTCTTCAACAGGTGCGACTATTG
AAGCAATGAAGGCCCCTGCGTTTTCTTTGA
Right flanking sequence : From position 1959253 (length bp)
AGCACCTAAAATAAAGCAAGACACTTCAAGGGTTAAGCAGTTTATTATAGCGAATCCCGGATTTAGGTAA
TAAAAACAGTGTTCCCCAAAAACCAGATGT

Print the CRISPR sequence : From position bp To position bp