CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_014152_3
Flanking alignement tool
Page manual
  
Home Page
NC_014152_3                                                                                                                 
top
Strain :
Thermincola sp. JR
RefSeq :
NC_014152 (chromosome circular)
CRISPR id :
NC_014152_3
DR consensus (36 bp) :
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
Number of repetitions :
27
Begin Position :
2078344
End Position :
2080300
2078344
ATTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
GCAAACCCGCCGGAACAGGCCGCCGGGGGATGGGACC
2078416
2078417
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
TAAATTCCGAATGGATACTATTTCTTGTCCAGATGCTG
2078490
2078491
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
TTTGAAGCCGATGTAGCCTACTACGAAATTTACGCTTC
2078564
2078565
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
AATCAAAAATAATCCCCCGCCTCCCGGCGGGTAGA
2078635
2078636
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
GCAGGGCCGGGACTAAAATTGGCTATAGTACTC
2078704
2078705
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
GATATTATACGAATTATTGTAATTCGTTCTGGTC
2078774
2078775
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
TATGACATAGCTACGTATAATGCCAGAAGAATAAC
2078845
2078846
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
AAATAATGGACGACACGGGACTATATTCGCCTAAAG
2078917
2078918
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
TGGCTTTGCAACTTCAGCTGGTGAAGTTGTGGTCATA
2078990
2078991
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
TTATATGACCCCTTATGACTATTCATGTTCTGGTAGTAT
2079065
2079066
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
GTAGTAGCACATAGAAAAGCAATGTCAGCTAGCTTTTCT
2079140
2079141
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
TGCTACATGTTCACAGTCCATTGTCCCCGCTGCGCCAGTGA
2079217
2079218
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
ATTGATAATAATGGTACTTTAGAAGAATTATATCAAAA
2079291
2079292
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
TTATCATCAATCCATTTCAAAAAATATTCTACCGTAC
2079364
2079365
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
TTATATGACCCCTTATGACTATTCATGTTCTGGTAGTAT
2079439
2079440
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
GTAGTAGCACATAGAAAAGCAATGTCAGCTAGCTTTTCT
2079514
2079515
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
TGCTACATGTTCACAGTCCATTGTCCCCGCTGCGCCAGTGA
2079591
2079592
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
ATTGATAATAATGGTACTTTAGAAGAATTATATCAAAA
2079665
2079666
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
TTATCATCAATCCATTTCAAAAAATATTCTACCGTAC
2079738
2079739
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
AGTACAGAGCCATTTCTTGGTTCTGCCATCAAGCAATTC
2079813
2079814
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
GAATTAACACTTGTTTCTTCGGACAGTTCGACGAGGTG
2079887
2079888
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
TGCTCCGGGGTCACGGAGGGAGATTATTACTTTCCCCCTCCGC
2079966
2079967
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
AAGCCATTTTAGCACGTTCTTACAGAATCGAAAAAGCACAA
2080043
2080044
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
AAAAATGCAAATCAAGACAAATTGTGTTTGGACAAAA
2080116
2080117
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
GCTGTTATTTCCTGCGCTACGTGTGCACCCATAGCGTAGG
2080192
2080193
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
ATGAATTAAGGATGGAATAGTTAATTCCTGCACAGT
2080264
2080265
GTTTCCGTCCCCTTACGGGGATAAGGAAGATTAAAC
2080300
Left flanking sequence : Till position 2078344 (length
bp)
AAGGCAAACATCAGTTGACAGTTGACAGTTAACAGTTAACAGTTGAGATAAGGAAGATCAAACTTTGGCA
AAGGCAAATATATCATTTTCGGCAACCCAA
Right flanking sequence : From position 2080300 (length
bp)
CCTAGCTGCGAAATTGCGCATGGGAGTAAGGCCGAAAAACGGCTTTGCGGCTTATGCACCCATTGTATAC
AACCACACCGCAATTTTGCATAATAAACCC
Print the CRISPR sequence : From position
bp To position
bp