Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014152_5                                                                                                                 top


Strain : Thermincola sp. JR RefSeq :NC_014152 (chromosome circular)
CRISPR id : NC_014152_5
DR consensus (30 bp) : GTTTCAATCCCTTATAGGTAGGCTAAAAACNumber of repetitions :56
Begin Position : 2567569 End Position : 2571266

2567569GTTTCAATCCCTTATAGGTAGGCTAAAAACTAAACGTTTTGTGGCAAAGCTTGATGTTATAGATAT 2567634
2567635GTTTCAATCCCTTATAGGTAGGCTAAAAACAACAACTCCTTCAACTTAGCTGCATCTGTTTTTTCTA 2567701
2567702GTTTCAATCCCTTATAGGTAGGCTAAAAACTCAATGATAAGCTTCCCTTGGGCCATGGCGAAAAATCAC 2567770
2567771TTTTCAATCCCTTATAGGTAGGCTAAAAACAATTTTATACAGATAGGACAGTTGCCAACCGGGAAGT 2567837
2567838GTTTCAATCCCTTATAGGTAGGCTAAAAACTGTACTTGCGCCACATGAGAGACTTTACCGTATTTA 2567903
2567904GTTTCAATCCCTTATAGGTAGGCTAAAAACTATTCTGGTTTTAACTGTTTTTTCGGTTCCCCGGT 2567968
2567969GTTTCAATCCCTTATAGGTAGGCTAAAAACTGGAAATTTTTTTCCGAAAAAAGAAGGATTTTTCCGTT 2568036
2568037GTTTCAATCCCTTATAGGTAGGCTAAAAACTTTTCCAGGACAAAAGCCAAAACAACCTTTTTACCTA 2568103
2568104GTTTCAATCCCTTATAGGTAGGCTAAAAACAAAAGGCCACGTAGAGCAAAGGTTTACCCAATGGTC 2568169
2568170GTTTCAATCCCTCATAGGTAGGCTAAAAACGGAAACCAAAAACCCTGGCGCCCTGCACCGCTGGA 2568234
2568235GTTTCAATCCCTCATAGGTAGGCTAAAAACTTCTTCTAAGTCGATGTTTCTTGCTCCAGCCAGGTCTG 2568302
2568303GTTTCAATCCCTCATAGGTAGGCTAAAAACTCGCAGCAGTATGCGCCGAACGGCAGCCTGGTACTGCGTG 2568372
2568373GTTTCAATCCCTTATAGGTAGGCTAAAAACTTGCCAAGGCGAAGGAGTTTGATGCGCTGCCTGGCG 2568438
2568439GTTTCAATCCCTTATAGGTAGGCTAAAAACCAGTGCTCTATCCATACTTTCACGCCATTTGACGCCG 2568505
2568506GTTTCAATCCCTTATAGGTAGGCTAAAAACAGGCCGGAAAACGGTTATTTGGTTGTCCCTGCTTC 2568570
2568571GTTTCAATCCCTTATAGGTAGGCTAAAAACGATTTTTGTTCGGCAAGGCAAGTATGCAGGATGTAC 2568636
2568637GTTTCAATCCCTCATAGGTAGGCTAAAAACTGATGCTCATTGTGGGTATTGTGCAGAAGTAGTT 2568700
2568701GTTTCAATCCCTCATAGGTAGGCTAAAAACTTGAATTATACAAGGTCTTAACATGCACCACAGAA 2568765
2568766GTTTCAATCCCTTATAGGTAGGCTAAAAACCATTATGGGCCTCCTGGGAGTCTTTTTTTCTTGCTTCAT 2568834
2568835GTTTCAATCCCTTATAGGTAGGCTAAAAACGACCGATTATTTGCGTAGTTTATATGATTCTTTTGC 2568900
2568901GTTTCAATCCCTTATAGGTAGGCTAAAAACTTGTGCCGCAGGTTTGGAACAACTGATTTCTTAGAACCAT 2568970
2568971GTTTCAATCCCTTATAGGTAGGCTAAAAACGTGTTTTCATACTGTTTAATTACCTGCCATCCATTTT 2569037
2569038GTTTCAATCCCTTATAGGTAGGCTAAAAACTGAATGGGCACAAATGCGAAGAGAGGGAATTGTG 2569101
2569102GTTTCAATCCCTTATAGGTAGGCTAAAAACCAGCCTGGCTTAGGTCAGGCTTATTTTTTTTATCCT 2569167
2569168GTTTCAATCCCTTATAGGTAGGCTAAAAACGTCATGGCCGTTACCCGGGGGATTGTTGATGTGTACGG 2569235
2569236GTTTCAATCCCTTATAGGTAGGCTAAAAACGGCACGGCAACCCATACCGTGCTGTACGCCTTCCA 2569300
2569301GTTTCAATCCCTTATAGGTAGGCTAAAAACGGTTGTTGATGTTAGGGTGGAACGGCTGCAGGATA 2569365
2569366GTTTCAATCCCTTATAGGTAGGCTAAAAACACAGAAATACCCTTTCGATATGGGCGAACCTTGGAA 2569431
2569432GTTTCAATCCCTTATAGGTAGGCTAAAAACAAAGATAACATACCACTACCATTTTCATTATACAAAG 2569498
2569499GTTTCAATCCCTTATAGGTAGGCTAAAAACGTAATCGGGCTCTCTTTTACCTGTTTTCCACTGAC 2569563
2569564GTTTCAATCCCTTATAGGTAGGCTAAAAACGAAATAGGCTGGACATTCACGCTTTACGTGGACTTTT 2569630
2569631GTTTCAATCCCTTATAGGTAGGCTAAAAACAGAGCTTTAGCTGAGGTAAAAGCAGAAATGGATTTT 2569696
2569697GTTTCAATCCCTTATAGGTAGGCTAAAAACGGCAGGGATTTTTTTGCATATCCATTTGCCGCTATGA 2569763
2569764GTTTCAATCCCTTATAGGTAGGCTAAAAACTCTTGCGTTATATTGTTTCTCTGTTTCGCTTGTATATC 2569831
2569832GTTTCAATCCCTTATAGGTAGGCTAAAAACTATATTGGACCGCGCGAAACACTGACAAACATAACT 2569897
2569898GTTTCAATCCCTTATAGGTAGGCTAAAAACTTTCATTCTCCTATGGCGGAGAAGCCCAGGTTATGGGCG 2569966
2569967GTTTCAATCCCTTATAGGTAGGCTAAAAACCTACGAACGCAACAATTTCCGTCTTTTCAGAAAATCTA 2570034
2570035GTTTCAATCCCTTATAGGTAGGCTAAAAACATAGACGATGCGGTTAAGGACCCTGCTAATGATAAAGC 2570102
2570103GTTTCAATCCCTTATAGGTAGGCTAAAAACTAAACCAACAGAAATAAAAACCGAAAAAGTACAGTA 2570168
2570169GTTTCAATCCCTTATAGGTAGGCTAAAAACTTTTCCTCCTTGTGTTATCTTTTGATTATATGTTATCA 2570236
2570237GTTTCAATCCCTTATAGGTAGGCTAAAAACTCCTCATAATAATGTAGTTATCCACAGAAGAATAAA 2570302
2570303GTTTCAATCCCTTATAGGTAGGCTAAAAACTCCGGCTGGGAAGCCTTACAAGCCCCGATAATTCCT 2570368
2570369GTTTCAATCCCTTATAGGTAGGCTAAAAACAAACAGGGGGAAATTGACCCTGTTGTATCTGTTGAT 2570434
2570435GTTTCAATCCCTTATAGGTAGGCTAAAAACCTTTTGAATATTCCTCTTTTTATTTCCTTTTTACGACG 2570502
2570503GTTTCAATCCCTTATAGGTAGGCTAAAAACCAATTACATCTAAAAACTCATATTGACCAGTAGAA 2570567
2570568GTTTCAATCCCTTATAGGTAGGCTAAAAACGGTTACCTATTCGGATTATCGTAACCGAAACACCTAT 2570634
2570635GTTTCAATCCCTTATAGGTAGGCTAAAAACTGGGGAGCGCAAGCCGAGAATTGCGCTAACTACTTGG 2570701
2570702GTTTCAATCCCTTATAGGTAGGCTAAAAACGAGCTTTAGCCGAAGTAAGAGCAGAAATGGATTTTT 2570767
2570768GTTTCAATCCCTTATAGGTAGGCTAAAAACCATGATTACCACTCCTTACCTTCTCCATTTTAGGTTT 2570834
2570835GTTTCAATCCCTTATAGGTAGGCTAAAAACTATAAAATAGTAGAATACGTTTTTGAACCAGCCAAA 2570900
2570901GTTTCAATCCCTTATAGGTAGGCTAAAAACCATATTCGTCATATGATACCTCATTTTTTGATAGTCCTG 2570969
2570970GTTTCAATCCCTTATAGGTAGGCTAAAAACGAGAAAATTCGCAGCATTATGGAACGGCATTAACTA 2571035
2571036GTTTCAATCCCTTATAGGTAGGCTAAAAACGGAACAGTTGCTTAACGAATTCCAAAAAAATGACTATT 2571103
2571104GTTTCAATCCCTTATAGGTAGGCTAAAAACTCCGATTGGGTATATAAAAATTATCCGAAGTGTTA 2571168
2571169GTTTCAATCCCTTATAGGTAGGCTAAAAACCGAACCGAACCGTCACAGATTATGCCGTCTTTATCCT 2571235
2571236GTTTCAATCCCTTATAGGTAGGCTAAAAAC2571265
Left flanking sequence : Till position 2567569 (length bp)
CTTTCTTGTTATTCCAATAGTTCTTAGTACAACGACGTAATTCATCTTCCTTTAAAGCATCCATTAATAC
AATTCCTCCCTCCTAAATTAGCAAAAGGCA
Right flanking sequence : From position 2571266 (length bp)
CCGTTCCGGTGGGCCAAAAAATCAGGTACAGCAAGGCTTTTTGGTTTTCTGTACCTTTCAGCATTTTATC
ATAAAAATGTTCTTTTTTAAAGGCCTGTTT
Print the CRISPR sequence : From position bp To position bp