Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014205_4                                                                                                                 top


Strain : Staphylothermus hellenicus DSM 12710 RefSeq :NC_014205 (chromosome circular)
CRISPR id : NC_014205_4
DR consensus (27 bp) : CTTTCAATTCTTTCTGTGTTGTTACTTNumber of repetitions :5
Begin Position : 487286 End Position : 487580

487286CCTCCAATTCTTTCTATATTGCTACTCAGAATTTACGAGGATTATTAGCAACGGTTTTATTCCCC 487350
487351CTTTCAATTCTTTCTAAGTTGTTACGAGATCAGACTATGAAATATTTTCTAGACCCAAGCGATTAGC 487417
487418CTTTCAATTCTTTCTACGTTGTTACATGACTAAGGCAGTTAATCTATTAGCAAACACAACAGTATTCCC 487486
487487CTTTCAATTCTTTCTGTGTTGTTACTTAACAACGGAGTAGTTCATATAGTGTTTAGCTTAAAGGTGG 487553
487554CTTTCAATTCTTTCTGTGTTGTTACTT487580
Left flanking sequence : Till position 487286 (length bp)
AAGTAATAACTATAGGAGGACTAGGAACAATAGGCCTAATACTCAATATAAAATCATTCCCAACACTATA
CAAATCCCTAGACGCATTCATATAAACAAT
Right flanking sequence : From position 487580 (length bp)
CAGTTCGAATACGTTGCTACATTTATAGTTTTTATTCGAACCAGATATATATGCTTTTCCATACTTGATC
CCTTGGTTGATCCTGTTCGAACAGCTCACT
Print the CRISPR sequence : From position bp To position bp