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CRISPRs details
NC_014377_1
Flanking alignement tool
Page manual
  
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NC_014377_1                                                                                                                 
top
Strain :
Thermosediminibacter oceani DSM 16646
RefSeq :
NC_014377 (chromosome circular)
CRISPR id :
NC_014377_1
DR consensus (30 bp) :
GTTACTAGCTTACCTATGAGGGGTTGAAAC
Number of repetitions :
70
Begin Position :
73465
End Position :
78146
73465
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GAGCTGATATAACTGATAATGCTGGTGGAATAGCTGA
73531
73532
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CCCCTACTTTAAATTTGTCCGCTATGCTCGCTTTCG
73597
73598
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TCCAGTAACTCCTGTATGACTTTCTTCTTCATATCTCGC
73666
73667
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CCGCCTCTCGGTATCCATTCCGCTCCAGTAGTGCAAAA
73734
73735
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GAATCCGCCCCTAATTCTTTTGATACAGAGCCGAAAA
73801
73802
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CCGCCTCTCGGTATCCATTCCGCTCCAGTAGTGCAAA
73868
73869
GTTACTAGCTTACCTATGAGGGGTTGAAAC
ATACCTCATCCTCGCCAGTCAGATCGTTCCAGAAGGGC
73936
73937
GTTACTAGCTTACCTATGAGGGGTTGAAAC
AGGTATCTGACTATGCTTTCTAATGCTGAGATAACAAG
74004
74005
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GCGATATATTCGCTGTTTTTCTTGAGGAGGAAATATC
74071
74072
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GCGATATATTCGCTGTTTTTCTTGAGGAGGAAATATCGA
74140
74141
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CACCTCGCTCCCGGCGGCACGCATAAGACCACATTTCTGG
74210
74211
GTTACTAGCTTACCTATGAGGGGTTGAAAC
ATGGCATCACGATCAAGACCCCGACCGAACTAAAGGTC
74278
74279
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GCGGTTCCCGTAGAAAAATATAGGGAACTCCAATAGCT
74346
74347
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CTTCTCCCCTACTCTCCCCTACCCTACCCTGTTGTGT
74413
74414
GTTACTAGCTTACCTATGAGGGGTTGAAAC
AGATTATTTATTTCTTCCTCAAAGTGATGGTAAAA
74478
74479
GTTACTAGCTTACCTATGAGGGGTTGAAAC
AAGAAATACCTGCACGCAGGTGGACTGCAGAAAGTGC
74545
74546
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TCCGATCGTATGGCGACCAGTTCCTTCGCTCTCTCCCA
74613
74614
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CGATTGGCGGGTCAAGAGAGTATGACAAGAGCAGAAGC
74681
74682
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TTGAAAAAGCTATACGACCGTCCATATAAATACTCGT
74748
74749
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CGATTGGCGGGTCAAGAGAGTATGACAAGAGCAGAAGC
74816
74817
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GAGCAATCGAAACAGCGATAACTGTTGGCGCTCCAGTA
74884
74885
GTTACTAGCTTACCTATGAGGGGTTGAAAC
AGGATGATATCCGGTGATGTTCGGGCACTTACCGG
74949
74950
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TATTTCTCCCGCTCACGCTTGAGGCGTTCGGAAAGAA
75016
75017
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CGGTTATAGTCGGGCTCTCAATCATAGGCGTTGCTAA
75083
75084
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CAAGACAGAGAGCCGAGGAATACACGAGGCGAGCTT
75149
75150
GTTACTAGCTTACCTATGAGGGGTTGAAAC
ATCTATTGCTACCGCGTCGATTTCGGCTTCTATTTCTT
75217
75218
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TACATACTCCCCCATGTGTAATGGGATTGGGGAGTATGAGTA
75289
75290
GTTACTAGCTTACCTATGAGGGGTTGAAAC
AATTCTAATCATAGAATAGCATAGATGGAATAAGAA
75355
75356
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CTCGATTTTTTCTTCAATAGCCGCCGAGGCGATGGAATT
75424
75425
GTTACTAGCTTACCTATGAGGGGTTGAAAC
ATTCATTCATATTGACACTCTCCTTTCGGTGTTCAA
75490
75491
GTTACTAGCTTACCTATGAGGAGTTGAAAC
CTAAAATGCTTTTCTATTGTTTCGGGTGAATATATGCG
75558
75559
GTTACTAGCTTACCTATGAGGGGTTGAAAC
AGCGGAAGGGCCCGAAGGCCCTGGCCGGGATTCTCG
75624
75625
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TACCCACAAAGGAGGGATTTTACAATACACCCCCGG
75690
75691
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GGGTATGACGAATTTGCAAAAGAATTAGGATTCGATT
75757
75758
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TTTCGTAAACCGATTTAAAAATCCTTCCTTCGCCGC
75823
75824
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TAGGTAATGTATTTGCAACCGCCGCAACCTTTTTCTTT
75891
75892
GTTACTAGCTTACCTATGAGGGGTTGAAAC
AAATTTCCGTTTATGTGAAAATATCTTTTTCGTAAA
75957
75958
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GAGTACTGTTTTTTATTTTTTTAAGGTAGTACTAAA
76023
76024
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CCGCTCCTGAAGTGCCTAATATCGCTGGCGGCGTCGGCGG
76093
76094
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TCGAAGAAAAATAGCCGCCAGCGTCGGCGATTTCA
76158
76159
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CCTTCCTGCCGAGCCGCAAATATTCGGTGCTGGTCTC
76225
76226
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CGGGGACACCGGTCACCCAGGGGCCGTTAGACTTCTT
76292
76293
GTTACTAGCTTACCTATGAGGGGTTGAAAC
ACGACATGGAATACAATTTCATCTAAGCTAGGGGATATATG
76363
76364
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TAAGATAGATATGCAGCATCCTCGTATTCTTCGCACATT
76432
76433
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CAGTTAGCGGCGGCACCAGCGGCAGCTTCCTCTTC
76497
76498
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GGGCATGACTCTGGGAGAAAGGGGAGCGTGACACCCC
76564
76565
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GCATATCAGCACTTACGTGAGAGTTCTGAATTAGGCC
76631
76632
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GCGTAAAATACGCACGAGCAAGAACCCGCACGACATTTTCA
76702
76703
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TCATTGAAATAGTCGAAAATTCCGCTGGTATCACACA
76769
76770
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GCTGTAACTGGTGGCTCTTATGTAACTTTCTCAATAT
76836
76837
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CCCACTGGTATTTCTATTGCGCCCCGTTTAGGTGGGC
76903
76904
GTTACTAGCTTACCTATGAGGGGTTGAAAC
AAAAAATTTTTGGCATGGCGTCACACTCCCTCCGCTC
76970
76971
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GCAAAATCGTCCAATGTAAGATTATGTTCTTCTCTAA
77037
77038
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GAAAATGACATGATTGAACGGAGTAGAAAGGTAGTCAAC
77106
77107
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TCTGCATGACAAAAGCATAGAGTTGCTTTATGTCTGC
77173
77174
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GTGCCTGGAACACTTTTTACCCGTTACTACGGATCATTTA
77243
77244
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TATAAACAAACAGTAGGGTTGGAACGACCCGAATTTA
77310
77311
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TGAGAAAAATAACGATGATTATACTAATAACCCTTTTT
77378
77379
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CGCGTATTACGCCCTCCATAAATTTCATAAGTGGCCAAG
77447
77448
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CTGCTGCCCTCATGAGAGGATGGAATGCCATTCTGA
77513
77514
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CCGTGCTGGCTCCTTCTGCACCGAGGGTTTCACCGAC
77580
77581
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CCAGCAAGCTATTCACCGAACGGGAGCGAGGTTTTG
77646
77647
GTTACTAGCTTACCTATGAGGGGTTGAAAC
CCTCCACTTCGCCCGCAAGTATATCGCCATAGTTTA
77712
77713
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TAATGAACCACTGAAAGCGCGAATGCGCCGTAGGTG
77778
77779
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TCTGCATGACAAAAGCATAGAGTTGCTTTATGTCTGC
77845
77846
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GTGCCTGGAACACTTTTTACCCGTTACTACGGATCATTTA
77915
77916
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GCAGAAGCGATGGGCAAAAGCATTGCCGAAGCGAGA
77981
77982
GTTACTAGCTTACCTATGAGGGGTTGAAAC
TGTCGAAAGAATCCAGGGTTTCAAGCCATTTCGGGAAG
78049
78050
GTTACTAGCTTACCTATGAGGGGTTGAAAC
GACAAAATCTCAATTCCAGTATACCACAAAGGAGGAA
78116
78117
GTTACTAGCTTACCTATGAGGGGTTGAAAC
78146
Left flanking sequence : Till position 73465 (length
bp)
CTGTTTCAGAAGGATTTTTTTAGTTAGTGGCGAAATAAATATAGAAAATTAAATAAACGTTTTTTCTGCT
TAAAACTTTAATTTTTTCATTATTTCATGG
Right flanking sequence : From position 78146 (length
bp)
CCAGGTCGCTAATCAACGACACAGGCACTTTTTCTATTTAGCCCCCTAATAGAATTGGAGAAAAAGTTTG
ATAATGTTACAATGTTAATTAGGGGGTATG
Print the CRISPR sequence : From position
bp To position
bp