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CRISPRs details
NC_014377_4
Flanking alignement tool
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NC_014377_4                                                                                                                 
top
Strain :
Thermosediminibacter oceani DSM 16646
RefSeq :
NC_014377 (chromosome circular)
CRISPR id :
NC_014377_4
DR consensus (30 bp) :
GTTTTTAGCCTACCTATAAGGGATTGAAAC
Number of repetitions :
26
Begin Position :
541723
End Position :
543432
541723
GTTTTTAGCCTACCTATAAGGGATTGAAAC
AGATTTACTTGATATATATTCCCCTGCCTATCGCGG
541788
541789
GTTTTTAGCCTACCTATAAGGGATTGAAAC
TCGGCGAAATGACGAGAAAGCCCGCAAAAAAGTAGTCCTTCG
541860
541861
GTTTTTAGCCTACCTATAAGGGATTGAAAC
GAGACATTTCTCGTATTTGCGTAGGTCTGGTTTTTCGG
541928
541929
GTTTTTAGCCTACCTATAAGGGATTGAAAC
CTGATTGATTATTTAGGAGCCGAAGACACGGAATATA
541995
541996
GTTTTTAGCCTACCTATAAGGGATTGAAAC
GGGACTCAACAGAATAACTTTATCAAACCTGATTATA
542062
542063
GTTTTTAGCCTACCTATAAGGGATTGAAAC
ATCCACACGTTCGTAAAAATAATTCTGTATGCCATAG
542129
542130
GTTTTTAGCCTACCTATAAGGGATTGAAAC
AATTCCGGCTGATCAGGTCTTTCTACATCTCCATCTC
542196
542197
GTTTTTAGCCTACCTATAAGGGATTGAAAC
AAATTTATTTCCCCACTTTATCCGAAGAAACAAAAA
542262
542263
GTTTTTAGCCTACCTATAAGGGATTGAAAC
TGCTGCCGCACATAGGACAATATCTTGCATTACTAG
542328
542329
GTTTTTAGCCTACCTATAAGGGATTGAAAC
CACCGTAATCGATATAAATTCTCCACTTTATACCCAG
542395
542396
GTTTTTAGCCTACCTATAAGGGATTGAAAC
TAGGTCTTATGGATAAGTTCGTTTTGTGTTGTGATA
542461
542462
GTTTTTAGCCTACCTATAAGGGATTGAAAC
GTACTGTAGTCGACTGGGGCTGCCCTGTGGCCCTAGT
542528
542529
GTTTTTAGCCTACCTATAAGGGATTGAAAC
TTTAGTTTTGACTTATAGGAATATGGAGAGATTAGA
542594
542595
GTTTTTAGCCTACCTATAAGGGATTGAAAC
ATTGATTTATTATTGGTATTTAAAGAAAATAGATGGT
542661
542662
GTTTTTAGCCTACCTATAAGGGATTGAAAC
AAAAGCTCCCTTTCGGTAAGAAGATCCATGGAACCAT
542728
542729
GTTTTTAGCCTACCTATAAGGGATTGAAAC
TGGCATCCCGTTTACAAAAGTGAATAATCTTTTCGA
542794
542795
GTTTTTAGCCTACCTATAAGGGATTGAAAC
ACGAGGATCCCCTTCCAGGAATGGACATAAGCGAGG
542860
542861
GTTTTTAGCCTACCTATAAGGGATTGAAAC
TTCAAACCCCACCGCCGTGCTGCTTCTGCTGCTGTGATC
542929
542930
GTTTTTAGCCTACCTATAAGGGATTGAAAC
GCGGTTACAATTACAAGCGTAAGACGCATTGAGCAAG
542996
542997
GTTTTTAGCCTACCTATAAGGGATTGAAAC
TCCAGGGATCGGGTGCAGATATGGTGAAGCTAGCTTCT
543064
543065
GTTTTTAGCCTACCTATAAGGGATTGAAAC
CTGCAAACATCCTAGCTAAAAATGCAGGCGTAGACG
543130
543131
GTTTTTAGCCTACCTATAAGGGATTGAAAC
TTGCCATTATTTTATATTTATCATTGCCATCAAAAACA
543198
543199
GTTTTTAGCCTACCTATAAGGGATTGAAAC
GTGTTTGTGCTTTTATATGGTTACTAAAACATATAGGTATA
543269
543270
GTTTTTAGCCTACCTATAAGGGATTGAAAC
CTAGATTGGTTAATGGGGGTTTCTGATGTTCGTAGC
543335
543336
GTTTTTAGCCTACCTATAAGGGATTGAAAC
TCAGGAATAAGCTCAAGCGTCTTATTCCTGGTCCGGG
543402
543403
GTTTTTAGCCTACCTATAAGGGATTGAAAC
543432
Left flanking sequence : Till position 541723 (length
bp)
TTGGGGAAAGAGGATTTTTTAAGTAGGTGGCGAATTATTTATAGAAAATTGATAAAATCTTTTTTCGGCT
TTAATCTTCAATTTTTTCTCTTTTTCACGG
Right flanking sequence : From position 543432 (length
bp)
AACAATATGCTCGGAGTGTCAAGAAGAATATTTTGCCCCCTAATAGAATTGGAGAAAAAGTTTGATAATG
TTACAATGTTAATTAGGGGGTATGAAATTG
Print the CRISPR sequence : From position
bp To position
bp