Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014537_2                                                                                                                 top


Strain : Vulcanisaeta distributa DSM 14429 RefSeq :NC_014537 (chromosome circular)
CRISPR id : NC_014537_2
DR consensus (25 bp) : GAAGATTTCAATAGAATATTGAAAGNumber of repetitions :8
Begin Position : 1084987 End Position : 1085507

1084987GAAGATTTCAATAGAATATTGAAAGATGTTGAGTGCACCTAACTCCCTGAGTAATTTAATCGCCTCGCTTGTATTG 1085062
1085063GAAGATTTCAATAGAATATTGAAAGTTCATTATCGAAATGCCATAATCTTCCGAATCCTGCTATTTGAGA 1085132
1085133GAAGATTTCAATAGAATATTGAAAGATTATCATTGATATTAGGTTTCCGTCTCTTTCGATGCTCTCGATTTCGTA 1085207
1085208GAAGATTTCAATAGAATATTGAAAGTAATGAGACGTGAACCTGTTTGGGGGGATAATGATGGAGTT 1085273
1085274GAAGATTTCAATAGAATATTGAAAGCCGTTGCAAAACCTTCCTCCAGTGTTATGAACCGCGAAACACCA 1085342
1085343GAAGATTTCAATAGAATATTGAAAGAATAGGTCGTGCGGGCTTAATGACGTGAGTATTAGTGCGTGC 1085409
1085410GAAGATTTCAATAGAATATTAAAAGTGTGGACCCATTGATTAATGTCTGCTCAGCTATTTTGTTGCAATACT 1085481
1085482GAAGATTTTAATAGAATATTGGGGA1085506
Left flanking sequence : Till position 1084987 (length bp)
AAACACGAACCACAGCAATTAAGAGCAGAAAGACGTTCCAACGGCACCAAAAACACCAAGAAGAAAAACT
TAAAAAAGACCAAAACAAACCAATGCACCG
Right flanking sequence : From position 1085507 (length bp)
GAGGGTTTTGGTGGTTAGGGCGTTGTTTGGGTGTGGTGGGTCTTCTATGGTTTGGTGTGTGGGTTTTGTT
GCGTTAGGGGTATAAATCCTTAGATGCTGT
Print the CRISPR sequence : From position bp To position bp