Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_014538_2                                                                                                                 top


Strain : Thermoanaerobacter sp. X513 RefSeq :NC_014538 (chromosome circular)
CRISPR id : NC_014538_2
DR consensus (30 bp) : GTTTCAATTCCTTATAGGTAGGCTAAAAACNumber of repetitions :11
Begin Position : 2340499 End Position : 2341198

2340499CACTATTTTCAGGATAGGTAGGCTAAAAACTAGAGAGGGTAAAAGCGGCATGGCAAGTTTTTGAAA 2340564
2340565GTTTCAATTCCTTATAGGTAGGCTAAAAACTTAAAGGAGGAAGATAAAAATGATAACTTCTGTAAA 2340630
2340631GTTTCAATTCCTTATAGGTAGGCTAAAAACAAGGTATCAAAAATTATGCTTATTTTGCGCAATAGAGAA 2340699
2340700GTTTCAATTCCTTATAGGTAGGCTAAAAACCAAGCCAAACAATATACGTTAAGTTTTATTTTGCTGA 2340766
2340767GTTTCAATTCCTTATAGGTAGGCTAAAAACATCGGGCCGGTCAGGGAAGTGGAACGGTTGTAATTT 2340832
2340833GTTTCAATTCCTTATAGGTAGGCTAAAAACTGGGGACACAATTTACGATTAGGGACACAAAAACACC 2340899
2340900GTTTCAATTCCTTATAGGTAGGCTAAAAACCTGTATAAGTTGCAACTCCACTATTATCAAGCAATCTAA 2340968
2340969GTTTCAATTCCTTATAGGTAGGCTAAAAACTTGGTTTCGGGCTGAACAGGTAAAGGCGTTTTTGCAA 2341035
2341036GTTTCAATTCCTTATAGGTAGGCTAAAAACGATACATTTACACCAACGGTAAAAAACCTTTAAAAGG 2341102
2341103GTTTCAATTCCTTATAGGTAGGCTAAAAACTCTTCATGTTCCTATCACCCCAAGCCTGTTATTCTC 2341168
2341169GTTTCAATTCCTTATAGGTAGGCTAAAAAC2341198
Left flanking sequence : Till position 2340499 (length bp)
TCTGCAGTGTCTTAACTTTTAATTTAACTTTATTAACCATTTATTTATCCCATATTTTTACATCGGTATG
GGTTTAGTTTTTTGTTGCCTTTTTGAGAGA
Right flanking sequence : From position 2341198 (length bp)
GAAAACTAACCCGCAGCCGATGCGGGGAGATAAAAAAAGTTTCAATTCCTTATAGACTCCCATGCCGCAA
ATGCAGCACCAGCAGAGGATGAAAATGTCC

Print the CRISPR sequence : From position bp To position bp