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CRISPRs details
NC_014749_1
Flanking alignement tool
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NC_014749_1                                                                                                                 
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Strain :
Calditerrivibrio nitroreducens DSM 19672
RefSeq :
NC_014749 (plasmid pCALNI01 )
CRISPR id :
NC_014749_1
DR consensus (28 bp) :
GTTTCATCTGAACCATGTGGGATTTAAA
Number of repetitions :
6
Begin Position :
33042
End Position :
33395
33042
GTTTCATCTGAACCATGTGGGATTTAAA
GGTTTCTTCCACTTTCTTTACTTCTTCTTGTATTTCA
33106
33107
GTTTCATCTGAACCATGTGGGATTTAAA
GTTAAATATTCAACACGTATGTCTTCAATAATGTTCGC
33172
33173
GTTTCATCTGAACCATGTGGGATTTAAA
TCAGGGTACGTAAGGGCAGTTTTGGACGTGGGGTTGA
33237
33238
GTTTCATCTGAACCATGTGGGATTTAAA
TTATGTCACCGGTGATCATCCAACTATGGGAGAAGCAA
33303
33304
GTTTCATCTGAACCATGTGGGATTTAAA
GTCGAAGAAAATGGATTTTAGAGAGGTTGGCAGAGA
33367
33368
GTTTCATCTGAACCATGTGGGATTTTTA
33395
Left flanking sequence : Till position 33042 (length
bp)
AAAAATTAAAATTTTCGGGGGTTGATTTTTTTAAGAAATTTTATTAACATGTTAATATAGTAAGCAAATT
TAATATTTAAACAGCACCATGATATTTTGG
Right flanking sequence : From position 33395 (length
bp)
AAGCTTGGGACAAAAAATGGGGGCATTCACCCACCAGCTATTTTTAAAAAAGCTTTTTCATTGTTGATTT
AGATATTTTCTTACCGTTTCTGGGTCAAAA
Print the CRISPR sequence : From position
bp To position
bp