Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_014758_1                                                                                                                 top


Strain : Calditerrivibrio nitroreducens DSM 19672 RefSeq :NC_014758 (chromosome circular)
CRISPR id : NC_014758_1
DR consensus (36 bp) : GTCGCAATCCCTTAAAGTCAGGTCAATGATTCCAACNumber of repetitions :28
Begin Position : 1652519 End Position : 1654555

1652519TCCTTGCTTGCGCAAAGTCAGGTCAATGATTCCAACTTTATTATCTCATCCAGTGACTGAAGTAGCCTCC 1652588
1652589GTCGCAATCCCTTAAAGTCAGGTCAATGATTCCAACTTACAGACATCAAGAGTTGAACTTAATAGCTCAGTTG 1652661
1652662GTCGCAATCCCTTAAAGTCAGGTCAATGATTCCAACGAGGAAGCTATGAGGCTAAAAGAAGTTTTAAAAA 1652731
1652732GTCGCAATCCCTTAAAGTCAGGTCAATGATTCCAACAGATACGTCGGGGTTAAATTAAACCAGGATGAGATCAA 1652805
1652806GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACAATAATAGTATAAACCAAAATAGTCTGACCGAGAATAG 1652879
1652880GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACAAAAGAAAATAGATGTGAGCATATATGCAGATCCAA 1652951
1652952GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACAGAGTAAGCCCAAAAGATTAGTTATGTTTAAAATAAAAA 1653026
1653027GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACAAAATGGAGTTAAAAAATATGATTGAAAAATATGTAGGAAA 1653103
1653104GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACGAAAATCTACACTAGCTAAGTTGACCTCTGAAGAACTTAAA 1653180
1653181GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACACGGATATGTTTTTTTTATTAGAAAAAACGATGAGATA 1653254
1653255GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACACGGATATGTTTTTTTTATTAGAAAAAACGATGAGATA 1653328
1653329GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACTGAGATGTATAGCTTGCAATGAAATCATTGACGATTTTT 1653403
1653404GTCGCAATCCTTTAAAGTCAGGTCAATGTTTCCAACTTCATTACATTTTTGGAAAATAGACAGGGGTTTCAC 1653475
1653476GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACGAAAATTGTGGAGAAGTAGTAAGAGAGGGGGAGGATTAT 1653550
1653551GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACTAATCATAAATAAAAATTCTATAGTTGTTAACGCTAACAA 1653626
1653627GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACGATCCAGTTTACAAACCTTCATTTTATGCAAATAGATAA 1653701
1653702GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACGGATTATCTGTATTATTGTGAGTATTGTGGTGAGTAT 1653774
1653775GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACGGGCTATTAAAGCCCCATAAAAAAATAAAAAGGGGCTAT 1653849
1653850GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACTTAGATGTGTCTATATACGCTAAGCCTGATTTTGATT 1653922
1653923GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACTAACCCCTATAGCTCGGGAGTTCTTGCGAGAGCGATT 1653995
1653996GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACCATATTGTGGATGCGGTTTATGAAAATGATACCTTTCTCGT 1654072
1654073GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACAGAAAATTAGAGAAAGAAAAAATAAAAAAAGATATGATGG 1654148
1654149GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACGATGAAGTTTTAAAACTGTTAGAGGAAGGAATAATCCTC 1654223
1654224GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACTAAGAGGGCATCTGGCAGAGGAAATTGTCAAGAGATTAA 1654298
1654299GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACTACATACGATAAAGAAATTTTAAAAATAAAAGATAAAC 1654372
1654373GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACAAGAAAAAGACGCTTTGATAAAAAAAAATGAAAATAA 1654445
1654446GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAACAAATAGCCCGTCGCATAGGGGTAGATAGGACAGCAATA 1654519
1654520GTCGCAATCCCTTAAAGTCAGGTCAATGTTTCCAAC1654555
Left flanking sequence : Till position 1652519 (length bp)
CAGTGATTCTGACTATAGAGACGCCCAACTTGGGCGTCTCTACGATAATACAGTCGCAATCCCTAAAAAC
ATCGGGATTATATTTGCCCGATGTTTCTGT
Right flanking sequence : From position 1654555 (length bp)
AGTACCCTTTTTTTATATATCATTTTTCAATGAGTTGCAACCCCTATTTTCGTGTTCCCCCCTGGGGGGA
GGGGGGTGTACCCCCCAAATTTTATGGTCA

Print the CRISPR sequence : From position bp To position bp