Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015571_9                                                                                                                 top


Strain : Porphyromonas gingivalis TDC60 RefSeq :NC_015571 (chromosome circular)
CRISPR id : NC_015571_9
DR consensus (36 bp) : GTTGGATCTACCCTCTATTCGAAGGGTACACACAACNumber of repetitions :4
Begin Position : 1515077 End Position : 1515310

1515077GTTGGATCTACCCTCTATTCGAAGGGTACACACAACGATGTGGCTGTAGATGCACTCTTCCGCAAA 1515142
1515143GTTGGATCTACCCTCTATTCGAAGGGTACACACAACGAAGTGGCCAATGTTCGATAGGCTGCTCAG 1515208
1515209GTTGGATCTACCCTCTATTCGAAGGGTACACACAACACTGCCATATTATATAAGTGTGATTATTTT 1515274
1515275GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC1515310
Left flanking sequence : Till position 1515077 (length bp)
GACTGTTTTTCGCCGGCTTGCAGTGGCTCCAAAGCCTTACCGTCACTCACTTTCTGTGGAATGATGACTT
CTCAATCGGTTTCAAATTCGATGGGGGTAG
Right flanking sequence : From position 1515310 (length bp)
ATGATTCTTGATTGGTGGCTTGGGCGTTGAAAAGTGCAGTAGTGTGGGGATTCTTCCTCGTTGGGGCTTT
TTCGCTACATTTGCAGGCGGACAAGCTGCT
Print the CRISPR sequence : From position bp To position bp