Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015848_5                                                                                                                 top


Strain : Mycobacterium canettii CIPT 140010059 RefSeq :NC_015848 (chromosome circular)
CRISPR id : NC_015848_5
DR consensus (36 bp) : GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACNumber of repetitions :30
Begin Position : 3181398 End Position : 3183563

3181398GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTGATGGTGATTCGGTGGTCCTCACCTATCACGGAGA 3181469
3181470GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTGACAGACGCGTGCTTAGCCGACGCGCGCTTGTTCGATG 3181545
3181546GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACGTGGGCCAGACAATCCGGCCGACGCTACCCTTCTG 3181616
3181617GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCTGACGACTTGCCGCCACCGACACCGATCAGGCCGTGTCGTGAT 3181697
3181698GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTGCGGGCTCGTCATGACCGGATCGCCGCGCAGAA 3181768
3181769GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACGTACAGGAGAACACCGAACACCACTTCGACCTCTGGATG 3181843
3181844GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACGACACGCCAACGCGCCGCCGTCGCCGGGCAACAACCAGT 3181918
3181919GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCACTGGGACAAGAAAACTGAAACCCGTTGAAACACAC 3181991
3181992GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTCGGCTGGAAAAAGGCGCGCGACAACCGCATTGTCAAGC 3182067
3182068GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTGAATTGATCACAGTCCAAACATTTGGCGTCAACTA 3182140
3182141GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTGTTAGGCATAAGCACACCAGCACCTCCCTTGGCAAGG 3182215
3182216GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACATTAGGCGACTACGAACACACGCCTCAGCCCGGGGA 3182287
3182288GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACGTGAACGAAACCCGCGGCGGCACAATCGAAG 3182354
3182355GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCGCACTCTACTGCCGCACAGCTCGCTATGTACGCCAA 3182428
3182429GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACGCTACGCGACCACCACATCCGCAACCGCGCCGCCATCGA 3182503
3182504GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTTTTTACCCGGATACAGGCGAAACCGTCCATGCTGCT 3182577
3182578GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTGAAAGACCAGCCCACATGGCCCAATACAGCGTCGTTGAAG 3182654
3182655GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACGGTTGCTGGATTCGCCCGTCGCTGCAATTTACTGAA 3182726
3182727GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCGCCTTCGCCTGATCAGGCGTAATCGCCACAT 3182795
3182796GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTGACCGGCGCGGACTTGATCCGCGCAAACTTGTCG 3182867
3182868GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACATTGAGGCTGGAAACGACGACGCGCTAGTCGGAAT 3182938
3182939GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTTCTGCGACGACCACTGGCGCGAATGTGCTTCCGGTAT 3183013
3183014GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTTCACGGACCTGTTCGTGGTCGTGCCCGATGACGCGG 3183087
3183088GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTCTGAGCCGTGGACCTCGACGCGTAGACCTTGTTG 3183159
3183160GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACAGAGGTCTACGCTTCGCATCCATGGGGTCAGCACCGA 3183234
3183235GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCGAGTTGGCCGCGGCCTAGTGGCCGCATCGAGCACCGC 3183309
3183310GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACATCGCGGTCAACGGCGTCAAGTCATGGAAGATCACCAA 3183383
3183384GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTCTCGGCGCCGCCGGGGCCGCTACCAGCGGGCAT 3183454
3183455GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACAATACCACGCAGTCGACGAATGCAACGACACCTCCAA 3183527
3183528GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC3183563
Left flanking sequence : Till position 3181398 (length bp)
AACGACGCGCCGACCCGCCCTACACCCTCAACTGCGAAGAGCCGGTTTTGGGTCTGACGACAGACACAAA
CCCGCGCACCGGCAGAAGCCCACTACCAGA
Right flanking sequence : From position 3183563 (length bp)
TCGATGGACAATTCGTCCAGCGTGTGGTAACAATGCCTGCTGATGATGTCATAAGAACACAAACTCCTCT
GCGCTGACAAGCCGTCCCCTTCCGTAGAAC
Print the CRISPR sequence : From position bp To position bp