Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_016070_7                                                                                                                 top


Strain : Thermoproteus tenax Kra 1 RefSeq :NC_016070 (chromosome circular)
CRISPR id : NC_016070_7
DR consensus (24 bp) : GAATCTCAAAGAGAGGATTGAAAGNumber of repetitions :16
Begin Position : 1103070 End Position : 1104118

1103070GAATCTCAAAGAGAGGATTGAAAGTCAAATTCACAATCAACTTTCTACTGAACTTCCCGTCATGGA 1103135
1103136GAATCTCAAAGAGAGGATTGAAAGGCGCGCTGTATACAGCGCGCCTTTCGCGGCAGATATCGCCCTCAGC 1103205
1103206GAATCTCAAAGAGAGGATTGAAAGCTTCGTCGAGAAGTCCTCGACGCTCAGAGACATATTCTACAACAA 1103274
1103275GAATCTCAAAGAGAGGATTGAAAGCTTCTTACTTCCTCAAGTCTCCTGGCTATCTCCTGAATTTTTTC 1103342
1103343GAATCTCAAAGAGAGGATTGAAAGAGGCTACGCGATGTGCTAATTCAGTTGCGCGACGTGGCCGACTC 1103410
1103411GAATCTCAAAGAGAGGATTGAAAGTCGACGACGATGAAGTCCGGATTGCTCGCGCTTATCAGCCTGAAC 1103479
1103480GAATCTCAAAGAGAGGATTGAAAGGTAGATCTCGACTGCCACCGCCGGCTTGGCGCCGCGCCACGTGTAAATT 1103552
1103553GAATCTCAAAGAGAGGATTGAAAGGGATAGACACGGCGGAAGCAATATGGACATCTGATCTCATCGA 1103619
1103620GAATCTCAAAGAGAGGATTGAAAGCTTTTATACATCTTTCTTTTTCGGCTATGTGCGACAACT 1103682
1103683GAATCTCAAAGAGAGGATTGAAAGTCTAGCTCAACTACCTTTTCGCCCATGTCCAAAGGCCCAGACCT 1103750
1103751GAATCTCAAAGAGAGGATTGAAAGAACAATAATGATATCGTGTGCAAAGATAGACAAAAGCGGC 1103814
1103815GAATCTCAAAGAGAGGATTGAAAGCTTGGGCGTTGGAGCGGACAGAGCCCGCGCGCTCTTGAGGGAGAGG 1103884
1103885GAATCTCAAAGAGAGGATTGAAAGCTTCCTCACTGCGCACTCTCTCGTACTTGCACAGTTTGGC 1103948
1103949GAATCTCAAAGAGAGGATTGAAAGACCGCCAGCTTGAGCATGTGCGTAGTCCCGCCGGTCTCCCACG 1104015
1104016GAATCTCAAAGAGAGGATTGAAAGTCTGGTGGAACCATAAACGGCAAAACCAATTCATCGTCCCAGACTTTGATTTTGT 1104094
1104095GAATCTCAAAGAGAGGATTGAAAG1104118
Left flanking sequence : Till position 1103070 (length bp)
AACCCCACCCCTTAGCCAACACGAGAACACGCCAGAACTAACACAAAACCCACCAGAGAAAAACTTAAAA
ACAGCCAAAAGCCAAAACCCAGAAGGCCCG
Right flanking sequence : From position 1104118 (length bp)
TCCATTGGCGCTTAGCCGGCCTTTGAAGCGCTCTCCGCCTACACTTTAATCGATGGGCGGGGGCCTCGCC
GGCAGGCATGCCCCCGGTACCGCATTACTT
Print the CRISPR sequence : From position bp To position bp