CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_016885_5
Flanking alignement tool
Page manual
  
Home Page
NC_016885_5                                                                                                                 
top
Strain :
Pyrobaculum oguniense TE7
RefSeq :
NC_016885 (chromosome circular)
CRISPR id :
NC_016885_5
DR consensus (24 bp) :
CTTTCAATCCTCTTTTTGAGATTC
Number of repetitions :
40
Begin Position :
999562
End Position :
1002179
999562
CTTTCAATCCTCTTTTTGAGATTC
CTTTACTGCGCGGTGGTATCGTTACATTGCCAATTGAAGTGA
999627
999628
CTTTCAATCCTCTTTTTGAGATTC
TCTCGTGTTACACAACTACGGTGGGATTGGCGTAGACGTAGTGT
999695
999696
CTTTCAATCCTCTTTTTGAGATTC
GTTTCGTTTGACTACGACGCTAAGAAGTTCGTGGTTAATGAG
999761
999762
CTTTCAATCCTCTTTTTGAGATTC
GTAAGCACGTCTACACCTGAGTACTGCCCGCGGACGTAGTTAG
999828
999829
CTTTCAATCCTCTTTTTGAGATTC
CATTTCACACTACCATGATTTTCTTGATTCTCAAATAGCAATGA
999896
999897
CTTTCAATCCTCTTTTTGAGATTC
ACTCATATGCCACGCCGGCGGCAGAGTGTTGCTACAGTACGT
999962
999963
CTTTCAATCCTCTTTTTGAGATTC
GCATGCGTCCTCATCAGCGCTTCGTACTCGCGGCGGAGGTACTCTG
1000032
1000033
CTTTCAATCCTCTTTTTGAGATTC
GGAGGCGGAAAAGAGGGGGGAGGGGTATCTTGTGATTAGAGCCGG
1000101
1000102
CTTTCAATCCTCTTTTTGAGATTC
AGATGATAGAGGCCTTGGCCAGGGCACTCGGCCGGGAGGCCC
1000167
1000168
CTTTCAATCCTCTTTTTGAGATTC
ATATCCCGGCTAGTTGCGCGTATTGGTGTATCCCCTGCA
1000230
1000231
CTTTCAATCCTCTTTTTGAGATTC
CAGAGAGAGATGTGCAGTTTATATTCCCTACGCGTAGAGATGTTCGC
1000301
1000302
CTTTCAATCCTCTTTTTGAGATTC
ATTCCGCTTTTTTGTACTCTATCTTTTTACACATGGCTAAGAG
1000368
1000369
CTTTCAATCCTCTTTTTGAGATTC
CCTAGCCATAGGAGCGAGGGGACAGAGACGACGTTTAGGTAGTCGT
1000438
1000439
CTTTCAATCCTCTTTTTGAGATTC
TCTGTTCTTTTATGAGACCTAAAACCGTTGCCCTGGGCTCT
1000503
1000504
CTTTCAATCCTCTTTTTGAGATTC
CATGTGAAAACTCATGGCTATGCCTAAGAAAAGCGCAATAAAT
1000570
1000571
CTTTCAATCCTCTTTTTGAGATTC
TTCAAGAAGACATGGTACCGGAAACAATAATAGTAAATACA
1000635
1000636
CTTTCAATCCTCTTTTTGAGATTC
AGCTCATTGTGTCGAAGCTGTGTATCTGCCTGCCTAGGAG
1000699
1000700
CTTTCAATCCTCTTTTTGAGATTC
CGAAGTCGCGGCTGACAACGGCCATCGCGGCGAAGCAGCG
1000763
1000764
CTTTCAATCCTCTTTTTGAGATTC
TCACTACAGAGACCAATACCGCTCGGCCTCGCCTATGTCAC
1000828
1000829
CTTTCAATCCTCTTTTTGAGATTC
CGGGCTCCGACAGCTCGATAATGTGGGCGCCCGTGACAAG
1000892
1000893
CTTTCAATCCTCTTTTTGAGATTC
ATTTCCTTTGCCTTCTTATATACATCAGGCGAGAGCCACACATG
1000960
1000961
CTTTCAATCCTCTTTTTGAGATTC
GAGGAAATAAATGAATTAGGCGACCAGGAATGGGAGGACTTAA
1001027
1001028
CTTTCAATCCTCTTTTTGAGATTC
TTCACGCGTTTTTTTCTCTCATGATTGGGACTGGGTTTA
1001090
1001091
CTTTCAATCCTCTTTTTGAGATTC
AGCCGATCGTAGAGAAAGTGGCTAACAGCAAGTACTCTAAT
1001155
1001156
CTTTCAATCCTCTTTTTGAGATTC
CTGGTAAGAAGGTTGTCATGCAGCTGCTGCGCGACCTCACAG
1001221
1001222
CTTTCAATCCTCTTTTTGAGATTC
TGCAATTGCGGCCGTCGGCGCGGCGGTTTACTTCGCGCACT
1001286
1001287
CTTTCAATCCTCTTTTTGAGATTC
GTTAGTTGCGGAAATCGAAAGATATTGGAACGTTCCAAAGTGGATA
1001356
1001357
CTTTCAATCCTCTTTTTGAGATTC
AGATGGGATATACCACTTCTTTGCCGTCAAGGAAGAC
1001417
1001418
CTTTCAATCCTCTTTTTGAGATTC
GCCAGGGTAATCTTCGAGAGTGATAGGTACGGAGTGGAGCTTA
1001484
1001485
CTTTCAATCCTCTTTTTGAGATTC
ACCGACTTCGGCAGGGGGGTTGTGGTGTCGGCTGTGTGGACA
1001550
1001551
CTTTCAATCCTCTTTTTGAGATTC
CCACTTCTCCTCAATGCAGCGTTCCGTGCACTTGTTCACGCAT
1001617
1001618
CTTTCAATCCTCTTTTTGAGATTC
CGGCATAGTCTGCGAGGGGGATGTATGCAGGCACGGGGATCAC
1001684
1001685
CTTTCAATCCTCTTTTTGAGATTC
ATTATAAACACCTGGACAATCCTCATCTCGCAACAGCTCTGAC
1001751
1001752
CTTTCAATCCTCTTTTTGAGATTC
CGTTTGTGTCGATGGGGTACCTATCTGGGCAGTACTACATATCGC
1001820
1001821
CTTTCAATCCTCTTTTTGAGATTC
GCCCTTCAATTTGGCAATATCTACAAACCTGCGGATATACGC
1001886
1001887
CTTTCAATCCTCTTTTTGAGATTC
TGTCTACAAGCTCGCCGAGCAACCTCCACGACGTTTCCGAAATC
1001954
1001955
CTTTCAATCCTCTTTTTGAGATTC
GATTCGATTAAAGTGCAACAAGTTCTGTGCATCAGTCTGCGT
1002020
1002021
CTTTCAATCCTCTTTTTGAGATTC
CCCGACACGTATCAACAATACACAACCAAGCCGTTACATGTGTAAAGA
1002092
1002093
CTTTCAATCCTCTTTTTGAGATTC
CATGGCAGATGCACTGGTATTGTTGGCAAAGGAGATATA
1002155
1002156
CTTTCAATCCTCTTTTTGAGATTC
1002179
Left flanking sequence : Till position 999562 (length
bp)
TTCCTATGCTCTTAGTCCTCCTTAAGAAGGGTCTCTGCGGAGGCGGGTGCGGCGATTTGGGCAAGGCAGA
AGATGCCGTAAGGTCGGCGCTCGAGGCGGA
Right flanking sequence : From position 1002179 (length
bp)
TGGGGTTTCTGGGTTTTTGTTTTTGTGGGTTTTTAAGTTTTTCTTGGGTGGGTTTTTGGCTGGGTTTGGC
GTGTTGTTGTGGTTGTTTTCTTGTGTGTTG
Print the CRISPR sequence : From position
bp To position
bp