Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_016901_2                                                                                                                 top


Strain : Shewanella baltica OS678 RefSeq :NC_016901 (chromosome circular)
CRISPR id : NC_016901_2
DR consensus (28 bp) : TTTCTAAGCCGCCTGTGCGGCGGTGAACNumber of repetitions :47
Begin Position : 3930094 End Position : 3932866

3930094TTTATGAACAGCCTGTATGGCATTGAACAATCGCATACTGATGAA 3930138
3930139TCTCTGAGCTGCCTGTGCGGCGGTGAACGAAGCGTTCGATCCGTTTGAAGATTTTAACGA 3930198
3930199TTTCTAAGCCGCCTGTGCGGCGGTGAACAAACTAGCATTCCTATAATTAACTTCTTGCGC 3930258
3930259TTTCTAAGCCGCCTGTGCGGCGGTGAACCATTAAAATCAAATTCAAGGAGGTGGACTAAA 3930318
3930319TTTCTAAGCCGCCTGTGCGGCGGTGAACAGCTTAAGGCTTCACCTGCAAAAATCTCTCAG 3930378
3930379TTTCTAAGCCGCCTGTGCGGCGGTGAACGGCAGAGGCTGAGTTATGCGCCATTTGATAAC 3930438
3930439TTTCTAAGCCGCCTGTGCGGCGGTGAACGCCAACACCATCAACACCATCCTGACCATCTA 3930498
3930499TTTCTAAGCCGCCTGTGCGGCGGTGAACTTTTGGAATATCTTTCAATGCATGGCCATTAC 3930558
3930559TTTCTAAGCCGCCTGTGCGGCGGTGAACCTCCCCCCGCGTCTAACACCCGCACCCCGTCT 3930618
3930619TTTCTAAGCCGCCTGTGCGGCGGTGAACCAAGGCGTCACCCAAAACACTGCGGCTATTCA 3930678
3930679TTTCTAAGCCGCCTGTGCGGCGGTGAACTTTAGCGTCTATCTACCGTGGCATGACCTATT 3930738
3930739TTTCTAAGCCGCCTGTGCGGCGGTGAACGATCCAACGCCAAACCATTGGCCGCGCCAATG 3930798
3930799TTTCTAAGCCGCCTGTGCGGCGGTGAACATGGTAGGTGCGAGGCACTCGAAAGCGCCGCC 3930858
3930859TTTCTAAGCCGCCTGTGCGGCGGTGAACTTGCGCCGAACTTCAAACTGTTTTTGCCAGCT 3930918
3930919TTTCTAAGCCGCCTGTGCGGCGGTGAACAAAGACTGGTTTATTGGCGACGGTTTTAAAGT 3930978
3930979TTTCTAAGCCGCCTGTGCGGCGGTGAACTTTTCTCGCCATTGTCGTTGTCCTGTTTTTTA 3931038
3931039TTTCTAAGCCGCCTGTGCGGCGGTGAACCCATTGAGGCGGAAGTAACGACCGCCATGATC 3931098
3931099TTTCTAAGCCGCCTGTGCGGCGGTGAACGAACCAGCTTATCGCGTTTTTCGTCCGTCAGC 3931158
3931159TTTCTAAGCCGCCTGTGCGGCGGTGAACACAGCGACCCCACGTATTTTCTCGCACTAAAT 3931218
3931219TTTCTAAGCCGCCTGTGCGGCGGTGAACTTCGCCCTTATTTATCTGCTCTGTGACGTACT 3931278
3931279TTTCTAAGCCGCCTGTGCGGCGGTGAACACTCCTCCAAATAATCCACATATTACCACACT 3931338
3931339TTTCTAAGCCGCCTGTGCGGCGGTGAACGCGCAATACAAGGGTGATTGTGCGTTATCAAG 3931398
3931399TTTCTAAGCCGCCTGTGCGGCGGTGAACTAAACGGTTATACATTTTATACCAGCAGTTTT 3931458
3931459TTTCTAAGCCGCCTGTGCGGCGGTGAACCAAGCCATACAGTCAGGAAGTGATATTGACGA 3931518
3931519TTTCTAAGCCGCCTGTGCGGCGGTGAACAATTCACCGGCCATTTCTTATAATTCAGCTCA 3931578
3931579TTTCTAAGCCGCCTGTGCGGCGGTGAACGAGGGTCGCAAGGCTTGACTCCATGCGGGATA 3931638
3931639TTTCTAAGCCGCCTGTGCGGCGGTGAACGTAAATCGTTTTTGTCGGTTCGTGGTAATACT 3931698
3931699TTTCTAAGCCGCCTGTGCGGCGGTGAACAGGTTAGAAATAAATGAAACTCTTTTATCACC 3931758
3931759TTTCTAAGCCGCCTGTGCGGCGGTGAACTAATGTCGATGAAATATCAGCGGCTATCAAGT 3931818
3931819TTTCTAAGCCGCCTGTGCGGCGGTGAACCTGTTGACTTGTTGGTCACTTTTTTTATTACT 3931878
3931879TTTCTAAGCCGCCTGTGCGGCGGTGAACGGAATACAGTTAAGGGGTATATCAACAACAAC 3931938
3931939TTTCTAAGCCGCCTGTGCGGCGGTGAACCAGTTGGGACTTTCTCAGCGGACTCTGCAAAC 3931998
3931999TTTCTAAGCCGCCTGTGCGGCGGTGAACCACCTTAGAAAATTCATGGGGCTTCATCTTGT 3932058
3932059TTTCTAAGCCGCCTGTGCGGCGGTGAACATGGTGCAGTAGACGTAACAACAATACTTAGA 3932118
3932119TTTCTAAGCCGCCTGTGCGGCGGTGAACAAGAGTTTCTAGAGTTAAAGGTTAATGAAAAA 3932178
3932179TTTCTAAGCCGCCTGTGCGGCGGTGAACATTTATTTCTAACCTATCACTGCTTGGATATT 3932238
3932239TTTCTAAGCCGCCTGTGCGGCGGTGAACGCAATACTCCCAGACTGGGGCATGGGTTAACT 3932298
3932299TTTCTAAGCCGCCTGTGCGGCGGTGAACGATTTCATTTGAAACTGCTTATAATGTTGAGT 3932358
3932359TTTCTAAGCCGCCTGTGCGGCGGTGAACCGTGTTTGGGTGCGTGACTCTCCTGCTTTGAT 3932418
3932419TTTCTAAGCCGCCTGTGCGGCGGTGAACTTACAGACCAACGCCTGATACCTTGTCCGTTA 3932478
3932479TTTCTAAGCCGCCTGTGCGGCGGTGAACGTCATGCGCAGTTATTGGACAAGAACGTCGCA 3932538
3932539TTTCTAAGCCGCCTGTGCGGCGGTGAACAGTGAGACTAGCCGCCAGTTCACTATCAGTAA 3932598
3932599TTTCTAAGCCGCCTGTGCGGCGGTGAACTTCACCCTTATTTATCTGCTCTGTGACGTACT 3932658
3932659TTTCTAAGCCGCCTGTGCGGCGGTGAACAGTTCTTCACGGTCTACCCCAGCCATATCGTT 3932718
3932719TTTCTAAGCCGCCTGTGCGGCGGTGAACGAAACTGTGACTGAAGAGTTTCTAGAGTTAAA 3932778
3932779TTTCTAAGCCGCCTGTGCGGCGGTGAACAATATTGGTTCGGCCATGACTGTTGACTTGTT 3932838
3932839TTTCTAAGCCGCCTGTGCGGCGGTGAAC3932866
Left flanking sequence : Till position 3930094 (length bp)
ACACAAAACTAAAATAATGATTTGTCATTTGATATCTTGGCGCGGAGTATAGCAGAATCACTCAATTAAA
ATCGCGCTCAAAAATCAACTTGCCATAGAT
Right flanking sequence : From position 3932866 (length bp)
AATAAATTACTAGTTTAAAAGTGAGTAACTACAATTCGTTAGGCTAAAAAACATTATTTTACCTTACGAA
AAACACACTGCAGTAACTCACTGTTTCTAT

Print the CRISPR sequence : From position bp To position bp