CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_016901_2
Flanking alignement tool
Page manual
  
Home Page
NC_016901_2                                                                                                                 
top
Strain :
Shewanella baltica OS678
RefSeq :
NC_016901 (chromosome circular)
CRISPR id :
NC_016901_2
DR consensus (28 bp) :
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
Number of repetitions :
47
Begin Position :
3930094
End Position :
3932866
3930094
TTTATGAACAGCCTGTATGGCATTGAAC
AATCGCATACTGATGAA
3930138
3930139
TCTCTGAGCTGCCTGTGCGGCGGTGAAC
GAAGCGTTCGATCCGTTTGAAGATTTTAACGA
3930198
3930199
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
AAACTAGCATTCCTATAATTAACTTCTTGCGC
3930258
3930259
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
CATTAAAATCAAATTCAAGGAGGTGGACTAAA
3930318
3930319
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
AGCTTAAGGCTTCACCTGCAAAAATCTCTCAG
3930378
3930379
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
GGCAGAGGCTGAGTTATGCGCCATTTGATAAC
3930438
3930439
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
GCCAACACCATCAACACCATCCTGACCATCTA
3930498
3930499
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
TTTTGGAATATCTTTCAATGCATGGCCATTAC
3930558
3930559
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
CTCCCCCCGCGTCTAACACCCGCACCCCGTCT
3930618
3930619
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
CAAGGCGTCACCCAAAACACTGCGGCTATTCA
3930678
3930679
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
TTTAGCGTCTATCTACCGTGGCATGACCTATT
3930738
3930739
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
GATCCAACGCCAAACCATTGGCCGCGCCAATG
3930798
3930799
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
ATGGTAGGTGCGAGGCACTCGAAAGCGCCGCC
3930858
3930859
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
TTGCGCCGAACTTCAAACTGTTTTTGCCAGCT
3930918
3930919
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
AAAGACTGGTTTATTGGCGACGGTTTTAAAGT
3930978
3930979
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
TTTTCTCGCCATTGTCGTTGTCCTGTTTTTTA
3931038
3931039
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
CCATTGAGGCGGAAGTAACGACCGCCATGATC
3931098
3931099
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
GAACCAGCTTATCGCGTTTTTCGTCCGTCAGC
3931158
3931159
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
ACAGCGACCCCACGTATTTTCTCGCACTAAAT
3931218
3931219
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
TTCGCCCTTATTTATCTGCTCTGTGACGTACT
3931278
3931279
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
ACTCCTCCAAATAATCCACATATTACCACACT
3931338
3931339
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
GCGCAATACAAGGGTGATTGTGCGTTATCAAG
3931398
3931399
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
TAAACGGTTATACATTTTATACCAGCAGTTTT
3931458
3931459
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
CAAGCCATACAGTCAGGAAGTGATATTGACGA
3931518
3931519
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
AATTCACCGGCCATTTCTTATAATTCAGCTCA
3931578
3931579
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
GAGGGTCGCAAGGCTTGACTCCATGCGGGATA
3931638
3931639
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
GTAAATCGTTTTTGTCGGTTCGTGGTAATACT
3931698
3931699
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
AGGTTAGAAATAAATGAAACTCTTTTATCACC
3931758
3931759
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
TAATGTCGATGAAATATCAGCGGCTATCAAGT
3931818
3931819
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
CTGTTGACTTGTTGGTCACTTTTTTTATTACT
3931878
3931879
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
GGAATACAGTTAAGGGGTATATCAACAACAAC
3931938
3931939
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
CAGTTGGGACTTTCTCAGCGGACTCTGCAAAC
3931998
3931999
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
CACCTTAGAAAATTCATGGGGCTTCATCTTGT
3932058
3932059
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
ATGGTGCAGTAGACGTAACAACAATACTTAGA
3932118
3932119
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
AAGAGTTTCTAGAGTTAAAGGTTAATGAAAAA
3932178
3932179
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
ATTTATTTCTAACCTATCACTGCTTGGATATT
3932238
3932239
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
GCAATACTCCCAGACTGGGGCATGGGTTAACT
3932298
3932299
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
GATTTCATTTGAAACTGCTTATAATGTTGAGT
3932358
3932359
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
CGTGTTTGGGTGCGTGACTCTCCTGCTTTGAT
3932418
3932419
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
TTACAGACCAACGCCTGATACCTTGTCCGTTA
3932478
3932479
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
GTCATGCGCAGTTATTGGACAAGAACGTCGCA
3932538
3932539
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
AGTGAGACTAGCCGCCAGTTCACTATCAGTAA
3932598
3932599
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
TTCACCCTTATTTATCTGCTCTGTGACGTACT
3932658
3932659
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
AGTTCTTCACGGTCTACCCCAGCCATATCGTT
3932718
3932719
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
GAAACTGTGACTGAAGAGTTTCTAGAGTTAAA
3932778
3932779
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
AATATTGGTTCGGCCATGACTGTTGACTTGTT
3932838
3932839
TTTCTAAGCCGCCTGTGCGGCGGTGAAC
3932866
Left flanking sequence : Till position 3930094 (length
bp)
ACACAAAACTAAAATAATGATTTGTCATTTGATATCTTGGCGCGGAGTATAGCAGAATCACTCAATTAAA
ATCGCGCTCAAAAATCAACTTGCCATAGAT
Right flanking sequence : From position 3932866 (length
bp)
AATAAATTACTAGTTTAAAAGTGAGTAACTACAATTCGTTAGGCTAAAAAACATTATTTTACCTTACGAA
AAACACACTGCAGTAACTCACTGTTTCTAT
Print the CRISPR sequence : From position
bp To position
bp