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CRISPRs details
NC_017045_2
Flanking alignement tool
Page manual
  
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NC_017045_2                                                                                                                 
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Strain :
Riemerella anatipestifer DSM 15868
RefSeq :
NC_017045 (chromosome circular)
CRISPR id :
NC_017045_2
DR consensus (47 bp) :
GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC
Number of repetitions :
13
Begin Position :
1020412
End Position :
1021382
1020412
ATTATGAATTGCTTTCAATTTTCACTATCTTTGTGATAATTCGCAAC
TATCTGCACAGGAGAAAATAGAGTCAATCA
1020488
1020489
GTTGTGAATTGCTTTCAATTTTCACTATCTTTGTGATAATTCGCAAC
GTCCGTTGTCGGTTCATCTGATACTATATC
1020565
1020566
GTTGTGAATTGCTTTCAATTTTCACTATCTTTGTGATAATTCGCAAC
TGGGATTTGACAAAACCTTACCTCAAAGAC
1020642
1020643
GTTGTGAATTGCTTTCAATTTTCACTATCTTTGTGATAATTCGCAAC
ATTTTACACGAAGATAAAGAGATGTATCTA
1020719
1020720
GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC
TAAATGTTTATTTATAGTTTGTTCGGTGTA
1020796
1020797
GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC
TCCCCCATCCGCTTTCAAGAGCTGCCTGTG
1020873
1020874
GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC
GCAATGAATAACTATATGGAAGCCTTGAAA
1020950
1020951
GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC
AACATTGCAATAAAACTAATAAACGAAGTA
1021027
1021028
GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC
ATAGACGAGATTGAGATATGACAACACCTC
1021104
1021105
GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC
GATTTTCAGCTAATTAAATTATTTAATAAA
1021181
1021182
GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC
GACAAAATAAAACAGATGTGCGATGGGATA
1021258
1021259
GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC
AACTACTTTCTAAAGCATTACAATTAAGAA
1021335
1021336
GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC
1021382
Left flanking sequence : Till position 1020412 (length
bp)
ATAGGGATTTTTAATTTAGTATCTAATTTAATTGTGTCGGTTTACATAATTGGAAGCGTGTTTTATATCT
TAAAAAATAAAACCAATAACAAACAGTAAT
Right flanking sequence : From position 1021382 (length
bp)
CTCAAAAAATAAACCCATTGTTTTTCAATGGGTTTTGCGTTTTTATAGGATTAGATTTTTTACTATTTCT
TCTCTATTTTTGTTTGATGTAAAGTCTTTT
Print the CRISPR sequence : From position
bp To position
bp