Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017053_1                                                                                                                 top


Strain : Streptococcus pyogenes MGAS1882 RefSeq :NC_017053 (chromosome circular)
CRISPR id : NC_017053_1
DR consensus (36 bp) : GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACNumber of repetitions :4
Begin Position : 781761 End Position : 781994

781761GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACAATCCAATGATTTTAAATTTAGTGAAGACT 781826
781827GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACTGACGAAATTATTAAACGTTGTTCTGGGGA 781892
781893GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACCAGTCATTAAGTATGCGGACTTAGTTAAGC 781958
781959GTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC781994
Left flanking sequence : Till position 781761 (length bp)
CTCTTAATAAATGCAGTAATACAGGGGCTTTTCAAGACTGAAGTCTAGCTGAGACAAATAGTGCGATTAC
GAAATTTTTTAGACAAAAATAGTCTACGAG
Right flanking sequence : From position 781994 (length bp)
AACATTGCCGATGATAACTTGAGAAAGAGGGTTCATACCAGCAGTCGGATACCTTTCTATTCTTCCTGTT
AAAACGTTTTCATGTTATAATAGGCAAAAG
Print the CRISPR sequence : From position bp To position bp