Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017179_13                                                                                                                 top


Strain : Clostridium difficile BI1 RefSeq :NC_017179 (chromosome circular)
CRISPR id : NC_017179_13
DR consensus (29 bp) : GTTTTAGATTAACTATATGGAATGTAAATNumber of repetitions :6
Begin Position : 1717891 End Position : 1718247

1717891GTTTTAGATTAACTATATGGAATGTAAATGTTGTAAGAAGTATCATTCTATTTTTTAATCTTTCT 1717955
1717956GTTTTAGATTAACTATATGGAATGTAAATTTCAGTGAGAATAAGCTTTATTGTCGATGTAACACTC 1718021
1718022GTTTTAGATTAACTATATGGAATGTAAATAGTACATATAATGAGTCTTTAACATCAGTTATGAAAG 1718087
1718088GTTTTAGATTAACTATATGGAATGTAAATGATTGTACTTTAGCGTCTGCACTAGCTTTGTCTATC 1718152
1718153GTTTTAGATTAACTATATGGAATGTAAATTATTTTACAGATGAACAATTACAGTTACTTCTTGAAT 1718218
1718219GTTTTATATTAACTATGTGGATTCAAAAT1718247
Left flanking sequence : Till position 1717891 (length bp)
GGTGTGTGATAAATGTTATCAATTGCACTACTCATGGTTCACTGCAAATTTAAGAGAGTTGTATATGTGT
AGGTATTGAAAATACTCAACTTATTTTGGG
Right flanking sequence : From position 1718247 (length bp)
TAAATAGAAAAAAGAAAGCACTTACTTAAATAGTAGGTGCTTTTGTTTTGCTCAAATTACTTAATTATAA
AGTTGCTAAGTACAACTTTTTAGAATTATA
Print the CRISPR sequence : From position bp To position bp