Institut de Génétique et Microbiologie

CRISPR details


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NC_017304_5                                                                                                                 top


Strain : Clostridium thermocellum DSM 1313 RefSeq :NC_017304 (chromosome circular)
CRISPR id : NC_017304_5
DR consensus (30 bp) : GTTTCAATTCCTCATAGGTACGATAAAAACNumber of repetitions :29
Begin Position : 3480042 End Position : 3481947

3480042GGTTCAATCCTTAACGGGTAAAAAAAACACGGATATTGAAAGTTGACGAAGAGGGAAAGAATAAACG 3480108
3480109GTTTTAATTCGTCATAGATGCGATAAAAAGTTTATCAAAGCTTTTGAAAACAGTTGCCTGAAAATTTA 3480176
3480177GTTTCAATTCCTCATTGGTACGATAAAAACGTATTTGAACGGCACATCCTTCAAATCCGCACCATC 3480242
3480243GTTTCAATTCCTCATAGGTACGATAAAAACTTGCTATAAAAAACAATAGAAATGCGATAGGTATAGAAT 3480311
3480312GTTTCAATTCCTCATAGGTACGATAAAAACGAGATAAGCCTTGTTATACTGTTCTGGTTAGACCT 3480376
3480377GTTTCAATCCCTCATAGGTACGATAAAAACAATTTGTGCATGCAGGATGGGAAAAAATTATTAAAA 3480442
3480443GTTTCAATTCCTCATAGGTACGATAAAAACGGAGGGATTTGTATGAAAGCAATGAAAGTTTTCACTAT 3480510
3480511GTTTCAATTCCTCATAGGTACGATAAAAACTAGAAGCCTCCAACCAAAGGAAGAATCTATAGGAG 3480575
3480576GTTTCAATTCCTCATAGGTACGATAAAAACGTGAGCCTGATGTTTTGTTCCCTTTCCACGCAGGAACA 3480643
3480644GTTTCAATTCCTCATAGGTACGATAAAAACGGGTTTAAATCTGTACCAATGCTTGAAGTAGATGGAAATA 3480713
3480714GTTTCAATTCCTCATAGGTACGATAAAAACTGACTGAAAAGGATGTTATCAAATTGTTTGCCATAT 3480779
3480780GTTTCAATTCCTCATAGGTACGATAAAAACAAGAACAAATTGAGAAATTAGGAGTTGAGATATAATGTG 3480848
3480849GTTTCAATTCCTCATAGGTACGATAAAAACTAATATTGATGGGTCTGACAGTTTCGTCCCTCCAAATT 3480916
3480917GTTTCAATTCCTCATAGGTACGATAAAAACGTGCTTGTGATTCAAGTTCATTTTCTGATATAGTCAGCA 3480985
3480986GTTTCAATTCCTCATAGGTACGATAAAAACTCTGTTCAATTGCTGTTATAGTATCGACTTGCATTT 3481051
3481052GTTTCAATTCCTCATAGGTACGATAAAAACACTGTAAGCGAAAATATAACCGGCATAACTCTTTATAA 3481119
3481120GTTTCAATTCCTCATAGGTACGATAAAAACCAGGGTAGCTATAACCCCCGCCTCCGGATTCACAT 3481184
3481185GTTTCAATTCCTCATAGGTACGATAAAAACAGGATTGGATTCGGATTGGATTGGATTGGAT 3481245
3481246GTTTCAATTCCTCATAGGTACGATAAAAACTAATGCATTGGGTAAGCTGTGTATGCACTGAATTAA 3481311
3481312GTTTCAATTCCTCATAGGTACGATAAAAACGGATATTAAAACCAGGGATGAACAACTTGAAGCAC 3481376
3481377GTTTCAATTCCTCATAGGTACGATAAAAACAACAAAGATTGACATTGGATGCTTCACATTTAATTT 3481442
3481443GTTTCAATTCCTCATAGGTACGATAAAAACGACGCACTTCCTGAACAAAATTTCATGGCACAATATCA 3481510
3481511GTTTCAATTCCTCATAGGTACGATAAAAACGAGGTGTCAAGAAAGGATGATGGTATGAAGGTTTTAGAGC 3481580
3481581GTTTCAATTCCTCATAGGTACGATAAAAACGCGTTTGTACCCTCTGAGGGGTACTTTCAGGAGTTCCT 3481648
3481649GTTTCAATTCCTCATAGGTACGATAAAAACGAGTATGCAATTTGCAATGATTTCGATTTTTTTGTTACGT 3481718
3481719GTTTCAATTCCTCATAGGTACGATAAAAACGTCCTTGCCCTTGACTGCATGAGCGGCGAGCCGGA 3481783
3481784GTTTCAATTCCTCATAGGTACGATAAAAACTGGCAGTAGGCTCTTACTTCCTCAAGGGTGGGTGGTA 3481850
3481851GTTTCAATTCCTCATAGGTACGATAAAAACCCCGGGAGCACCCCAGCCTGGACCAGACCGTCCAGGA 3481917
3481918GTTTCAATTCCTCATAGGTACGATAAAAAC3481947
Left flanking sequence : Till position 3480042 (length bp)
GCCAAAATGCTAATTATTGCAATGTATATTTATTAATACATGCGAGGTTACTATTGCCATTTGAGAAAAT
TTTAAGATTATATGTTATACGATAACAAAA
Right flanking sequence : From position 3481947 (length bp)
CCATAAAGCCTGCTAAACTTCTGCTTTTTATTTTAACCAATTGCAAAATAAAAATCAATACAAAAAAACA
AAAAATCCCTCTAAACAGCTACAAATCAGC
Print the CRISPR sequence : From position bp To position bp