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CRISPRs details
NC_017588_4
Flanking alignement tool
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NC_017588_4                                                                                                                 
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Strain :
Thermus thermophilus JL-18
RefSeq :
NC_017588 (plasmid pTTJL1801 ci)
CRISPR id :
NC_017588_4
DR consensus (36 bp) :
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
Number of repetitions :
26
Begin Position :
89345
End Position :
91189
89345
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TTGCCCTCCCGGGCGTCCTCCCCCAGGTCCCGCCA
89415
89416
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
AGCCATAGCTCGTGGCTCACCGCGGCGATAGCCTCA
89487
89488
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
GGGGGAAGTCGGACACGCAATGCCCCGCCGAGATGAA
89560
89561
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TTGGGGGCCTCCTCAGCCTCCAGGAGGCTCAATAG
89631
89632
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
AGGGTATAGCCTACGCTTATCATGTCAACCTACAC
89702
89703
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TTTGTATAGACCCCAGGAACGACCTGGGCGGATATC
89774
89775
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CCCCATGCCTAAAATCCTCTCCCTAGTTCTGGGCCAAG
89848
89849
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CCGGGGCGGGCGGGCATGGGCGGCCACCCTCAAGGGC
89921
89922
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TGTGGGGTGGGGGATGGGACCCCGGCCCGTGGGCCTTTC
89996
89997
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TTAGATGTTGTCTACGCCCCCGTCATGGATGAGCCTGG
90070
90071
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
GCGAGGGGCCTGGGCCAAGGACGGCGAAGTTCGTGC
90142
90143
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
AAATGCTTGCGGGCCCTGACAGGTTTGCGCTCGGGG
90214
90215
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TGGGGTTCTCCTTCCGTGCCCCTCCCTTCCGATTCTT
90287
90288
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
GATAGCGAGGTGTTCAGGATGGCTTTCTACCGCCAGC
90360
90361
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CCGTCCGCGTCTACCGCCACGGAGATCTCCGGGACG
90432
90433
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CTCCTGGACGGCCCGCATGGGGTGCAGGCCCTCCGC
90504
90505
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
GTCCCGGCGAGCGCCCAGGGGGAGAGGCGGGCCACG
90576
90577
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CATCACCCGAAGCTCCCCGATGGCCCGTTCCAGGA
90647
90648
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CTCTCCCGTGGAGCTGGAGGCCATAGCCTACGCTCT
90719
90720
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
GTGGAGCGCGGCGCCCACGGCCTCGGGCGGGGGAGG
90791
90792
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
ATAATCCCGCCCCCCCTGCACTTAGCGCATGCCTC
90862
90863
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
GACTCGAGCCCCCTCGCCGCCCCCTACTACGCGGAGG
90935
90936
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CCTGGTCCAGCAGGGGCACGAGGCCGAGCTCCTGGGG
91008
91009
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TTCAGGGGGAGGGCGGCGAGGCGCAGGTCGAGGAGC
91080
91081
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TCCCGCGCCTCCAAGGCGGCCTTCGCGAGGGGAAGCA
91153
91154
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
91189
Left flanking sequence : Till position 89345 (length
bp)
CTTTAGTCCCACGGCTTCTCTTCCAGGTTGACGCATAATCCCCCCGCGTGCGAAAATGGCCTCAAGACCC
CCCGCCTGGAGCCGCTTCCTGGAGGGGGCC
Right flanking sequence : From position 91189 (length
bp)
CCGAGATAAAAGCCGGTCGTGTAAGGATTTATGTGTAAGGGTCCGTGTTTAATAGGGGGGCACACCTTAG
CACGAGGAGGTGCCCCGTGGACCAGGATAC
Print the CRISPR sequence : From position
bp To position
bp