CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_018001_1
Flanking alignement tool
Page manual
  
Home Page
NC_018001_1                                                                                                                 
top
Strain :
Desulfurococcus fermentans DSM 16532
RefSeq :
NC_018001 (chromosome circular)
CRISPR id :
NC_018001_1
DR consensus (24 bp) :
CTTTCAATTCTTTCTATTGTATTC
Number of repetitions :
25
Begin Position :
973322
End Position :
974943
973322
CCCTCAATTCTTTCTATTGTATTC
TAAAGAAAAGCTTGACGAGGCAATGCTCGAGCAGATGATTCT
973387
973388
CTTTCAATTCTTTCTATTGTATTC
CTATAAACATACTCCACAGAGCTGCAACGCAAGAGATGTT
973451
973452
CTTTCAATTCTTTCTATTGTATTC
GAGGGCGGTCTCAGTCAAGAAAGAGACGTACGAGAAGCTC
973515
973516
CTTTCAATTCTTTCTATTGTATTC
TCAATTAACTTATATTTTTTCTGTGCTTGGTTTTGGGTTTGGGTT
973584
973585
CTTTCAATTCTTTCTATTGTATTC
TATAGTAATTCAAGCAGTCAGAGATGTAAAACCGCCGAGCAAA
973651
973652
CTTTCAATTCTTTCTATTGTATTC
GCTGCGAGAAACGAGGCCAGTGAGCTGCTCGGCAAAGTGAC
973716
973717
CTTTCAATTCTTTCTATTGTATTC
ATTTAGAGCTTAAGAAGCAGAGGCTGAATCTGTTGATCGAGCAGATG
973787
973788
CTTTCAATTCTTTCTATTGTATTC
GCGAGGGCGTCTCAGCTAGTGTTGACGTGTATCAAGCTAAATT
973854
973855
CTTTCAATTCTTTCTATTGTATTC
AAAATGATATTCGTAAACCGCCGGATTTCTACGATTTCCCAGGC
973922
973923
CTTTCAATTCTTTCTATTGTATTC
CATTTAATTTAATAGTCATATAGAATGATACATTAGCGAGTGG
973989
973990
CTTTCAATTCTTTCTATTGTATTC
TTCTTTTCAACGTATTCTCCGCCATTATAGCCGTACGTGTTCTC
974057
974058
CTTTCAATTCTTTCTATTGTATTC
CTCGCTATGAGCTGAGCGGTGATCGCAACTGGCAGCGTGAAATC
974125
974126
CTTTCAATTCTTTCTATTGTATTC
GTGATACTAGTTAATATTCTAACATTTGCCGCGCGCAGAAA
974190
974191
CTTTCAATTCTTTCTATTGTATTC
TTCAGGGGTTTATAAACTTTTACGTGGAGGGATGGGGGG
974253
974254
CTTTCAATTCTTTCTATTGTATTC
AATTACTTCTAATTATAAGATGCCCGTGTCTTCTATATAACA
974319
974320
CTTTCAATTCTTTCTATTGTATTC
TCCCTCAACACAAGCATCTGCCGAAGCACTCTACTGCAGTTCACTTCG
974391
974392
CTTTCAATTCTTTCTATTGTATTC
GACGAGCTTATACAGATTCTAGAGCCTAGCGAAAACAATGAAAAC
974460
974461
CTTTCAATTCTTTCTATTGTATTC
GCTCACAGCATGAGAAGAGCGGGGCAAGCATAGACACTATCCCG
974528
974529
CTTTCAATTCTTTCTATTGTATTC
TACAGGGCACCCCGTCTTCGTGAAGAAACTCGCGTAAGAG
974592
974593
CTTTCAATTCTTTCTATTGTATTC
TCTTTCCATTGCTATTATTGATCAGCGCAATGCGAGACCT
974656
974657
CTTTCAATTCTTTCTATTGTATTC
TTCACTGTGAATTGAAGTAGTTCTATTCACTGTGAATGGAGACA
974724
974725
CTTTCAATTCTTTCTATTGTATTC
TGCGGGCCAGGGCGAGGTGAATAGAATGAGCGCTCTCCCCGC
974790
974791
CTTTCAATTCTTTCTATTGTATTC
TGTACGAGTTAAAGACAGATGATGTTATTTTTCTCGA
974851
974852
CTTTCAATTCTTTCTATTGTATTC
TATACTCTTCCAAGTCCGTTCATAGTTGTTTCTGCTGTGGAGAC
974919
974920
CTTTCAATTCTTTCTATTGTATTC
974943
Left flanking sequence : Till position 973322 (length
bp)
ACAGTAACACACACATAAACAACACCACCATACGTGAAACAACCCACAACCATTTTAAACAAATATTTAA
AAGAAACAGAGCTAACCCCCACAACCCCAT
Right flanking sequence : From position 974943 (length
bp)
TATTTTTGATCTTTGATGTATTCATGTTTATTTTTGGTGTCTTGGGTTTTTAAATGTTTTGTGTTGATGT
GGGTTCATGGTTGTCATGTGGGGTTGATCA
Print the CRISPR sequence : From position
bp To position
bp