Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_018593_1                                                                                                                 top


Strain : Listeria monocytogenes SLCC7179 RefSeq :NC_018593 (chromosome circular)
CRISPR id : NC_018593_1
DR consensus (28 bp) : TTTTAGTTACTTATTGTGAAATGTAAATNumber of repetitions :4
Begin Position : 506167 End Position : 506389

506167TTTTAGTTACTTATTGTGAAATGTAAATTTTATTTCTCCTACGCTTTTCTTATTTCTGTAAATAAG 506232
506233TTTTAGTTACTTATTGTGAAATGTAAATCTAAAACATCCTTCACTGTATCAACTCCTTTCTATA 506296
506297TTTTAGTTACTTATTGTGAAATGTAAATACAATAATAGGATATTTTGGATTTGTCTGCGTTCCTG 506361
506362TTTTAGTTACTTATTGTGAAATGTAAAT506389
Left flanking sequence : Till position 506167 (length bp)
GGGGAAATCTTCAGGATAAGGGGAGGTTTTAGATGTTTTTTGGTAGGTCGACAGAAAGGGGCGTTTGAGG
TAAGATGGGAGTAAGAAGAAAAGTTAGAGG
Right flanking sequence : From position 506389 (length bp)
TTGGTTCCTTTGGAAAACAACAATAGCGTGTAGTATTGTTTTATTCAATCATTCAGAATTGGTAAATGCA
GAAACAGCAAAATAACCAAAAGTAATGACT
Print the CRISPR sequence : From position bp To position bp