CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_018609_1
Flanking alignement tool
Page manual
  
Home Page
NC_018609_1                                                                                                                 
top
Strain :
Riemerella anatipestifer RA-CH-1
RefSeq :
NC_018609 (chromosome circular)
CRISPR id :
NC_018609_1
DR consensus (47 bp) :
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
Number of repetitions :
11
Begin Position :
1164086
End Position :
1164901
1164086
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
CCTCAGTTTCTTCATCCACCCTACTGGTGG
1164162
1164163
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TTTCCTGCCCTTAATAATTTTAGCGATAAA
1164239
1164240
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TAACCCGCCAAATCGCCTGTTTGGAAAATA
1164316
1164317
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TATTGTTGCTAAATGCTCTTAGTATAAAGA
1164393
1164394
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
ACACGCACGAGGCGTAATTTATGTACGAAA
1164470
1164471
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TCTGGCGGCGCCACCCAAAAAAAGTTGTCG
1164547
1164548
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
GCCTGTGCCTGTGCGTATGAGTTAGAGGCT
1164624
1164625
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
GTGTCGCTAAACTTTAAATTTTCGTGATAT
1164701
1164702
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
GCTATGGGTGCGTGGCTAGACTTTGTAGAA
1164778
1164779
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
GCACAATTCACACTTAAAAAACAAAATAG
1164854
1164855
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
1164901
Left flanking sequence : Till position 1164086 (length
bp)
AAAAAGGATTTACTAAAGTAGAAATAGACAAGAAATAGTGAAAAATCTAATCCTAATAAAAAGCAAAACC
CATTGAAAAACAACGGGTTTATTTTTTGAG
Right flanking sequence : From position 1164901 (length
bp)
TATGCGGTTTGTCATCACTAGAAAACAGATGGCTTAAATAACTTCTATCTAGTAACAGGTCTTTTGTTAG
GTCTTTTCGTTTAATACCTAGCTCTTTTAT
Print the CRISPR sequence : From position
bp To position
bp