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CRISPRs details
NC_020246_1
Flanking alignement tool
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NC_020246_1                                                                                                                 
top
Strain :
Sulfolobus acidocaldarius N8
RefSeq :
NC_020246 (chromosome circular)
CRISPR id :
NC_020246_1
DR consensus (24 bp) :
GTTTTAGTTTCTTGTCGTTATTAC
Number of repetitions :
133
Begin Position :
1650673
End Position :
1658598
1650673
GTTTTAGTTTCTTGTCGTTATTAC
ATCATTGGAATTGGGCTAGCCCTATTTTTCTTGATA
1650732
1650733
GTTTTAGTTTCTTGTCGTTATTAC
AGTTGGTAGTGGGCAGATATCTAGCCCTGACCACT
1650791
1650792
GTTTTAGTTTCTTGTCGTTATTAC
TGATGTCGAATACCGGAGTCAAGATGTTGATGAAAA
1650851
1650852
GTTTTAGTTTCTTGTCGTTATTAC
AAATAACGAAGATTTAAGTGGTTTTGAACCAAGAGAA
1650912
1650913
GTTTTAGTTTCTTGTCGTTATTAC
TGATCACATGTTTTATCGGTAGTACATAATGTAGAAA
1650973
1650974
GTTTTAGTTTCTTGTCGTTATTAC
GAGGAGTTTGATAAACTTTTGGAATTTCTTGAGAG
1651032
1651033
GTTTTAGTTTCTTGTCGTTATTAC
GAAATATAGCAAGAGTTCTGTGGTCGCTATATTA
1651090
1651091
GTTTTAGTTTCTTGTCGTTATTAC
ATCATTAGCACGATATTTCATCATCACTGCAGTAATC
1651151
1651152
GTTTTAGTTTCTTGTCGTTATTAC
CTCAAAAATATAATGCGTAAGCTTAAATACCCAAC
1651210
1651211
GTTTTAGTTTCTTGTCGTTATTAC
TTTTTATTCTATATTTGAATAAAGCATAAAGTAATC
1651270
1651271
GTTTTAGTTTCTTGTCGTTATTAC
CTAATATTAATGGCAGTAGAAGTCTCGAACAACAC
1651329
1651330
GTTTTAGTTTCTTGTCGTTATTAC
TATCTCGCAATAAATGAGAGAGAGTCGGCGAGTGT
1651388
1651389
GTTTTAGTTTCTTGTCGTTATTAC
TATGTTTGTTGTATTGCTAGCGTAATATTGTATTACA
1651449
1651450
GTTTTAGTTTCTTGTCGTTATTAC
ACACAATATCTTAGTCATTACTGGAATGACTACAAC
1651509
1651510
GTTTTAGTTTCTTGTCGTTATTAC
ATCATTAGCACGATATTTCATCATCACTGCAGTAATC
1651570
1651571
GTTTTAGTTTCTTGTCGTTATTAC
TGTAGTAAATTGATATAATCGGATTGAAGAGAGTG
1651629
1651630
GTTTTAGTTTCTTGTCGTTATTAC
AGGGATATCTGGAAGTAATACACCAGTACTATAC
1651687
1651688
GTTTTAGTTTCTTGTCGTTATTAC
GCCATTCAACTCAAAACTTATAGAAGATTACGAAATA
1651748
1651749
GTTTTAGTTTCTTGTCGTTATTAC
CCAAATGCTAAAAATAGAAAAGGTAGGAGAGTTATTA
1651809
1651810
GTTTTAGTTTCTTGTCGTTATTAC
CGGTCTTCCAAAATTACTTAATGCTCTTGATAATAAA
1651870
1651871
GTTTTAGTTTCTTGTCGTTATTGC
TAAGGCTAATTTTGATCGATAAAGATGAAGAAGAAAG
1651931
1651932
GTTTTAGTTTCTTGTCGTTATTAC
TATCTAACCCTCTCTTTTTCAACTCTTTGAAGATAAAA
1651993
1651994
GTTTTAGTTTCTTGTCGTTATTAC
CCTCCCTGATATTCACCTTCTCCATTTCCTGTAGCAA
1652054
1652055
GTTTTAGTTTCTTGTCGTTATTAC
ACCAACTCTCAATTACTCATAATATTCAAACTAAAT
1652114
1652115
GTTTTAGTTTCTTGTCGTTATTAC
ATTCCGACTTGCTTAAATTCAGCTTTTTTGTACAA
1652173
1652174
GTTTTAGTTTCTTGTCGTTATTAC
ACAGTAGTAGCTCCGGCTGTCATTCCTAATAATAT
1652232
1652233
GTTTTAGTTTCTTGTCGTTATTAC
AAATGATATAAAAAATGAACAACAGAATATAAAA
1652290
1652291
GTTTTAGTTTCTTGTCGTTATTAC
AACAAGAATTGATGAAGTATTCAAAAGAGCGATATGAA
1652352
1652353
GTTTTAGTTTCTTGTCGTTATTAC
CTTTCAGAGGGCGAGATCGCAGAGTACTTGAGAATAGCG
1652415
1652416
GTTTTAGTTTCTTGTCGTTATTAC
ATTTCTGCAAATGTATAATACATCAATTTTATAAT
1652474
1652475
GTTTTAGTTTCTTGTCGTTATTAC
GCATCAGCAATTATGGAAGTCGCTAGATATTACTA
1652533
1652534
GTTTTAGTTTCTTGTCGTTATTAC
AGGAATGTGTACAACAGCTATAAAAAAAGAAAGAATTGT
1652596
1652597
GTTTTAGTTTCTTGTCGTTATTAC
TTTGGAATATCTTGCGAGGCGAGGGTGAGTGAACCT
1652656
1652657
GTTTTAGTTTCTTGTCGTTATTAC
AATAAAAGGAGATTTCATAGACTCTATTCTCAAAA
1652715
1652716
GTTTTAGTTTCTTGTCGTTATTAC
TTGTTCTAGAAGTGGCGCATTAAACGGCAGTTTTTG
1652775
1652776
GTTTTAGTTTCTTGTCGTTATTAC
GAGAGACAAAATTTCCAAGTAAGTGACTCTGAAAATT
1652836
1652837
GTTTTAGTTTCTTGTCGTTATTAC
AATATACGCTGCATAATATACGCTCTCTTACGCTAAG
1652897
1652898
GTTTTAGTTTCTTGTCGTTATTAC
AGAGTGGCATACCTTATTTGTTTTGTTGAGTTATGAAG
1652959
1652960
GTTTTAGTTTCTTGTCGTTATTAC
TTCCATTTTCTTCATAAGTAGCATCTCTCAACAAT
1653018
1653019
GTTTTAGTTTCTTGTCGTTATTAC
ATAACAATTGTCGGTAACTTATTTAGACGCTTA
1653075
1653076
GTTTTAGTTTCTTGTCGTTATTAC
TTTGATACGATTACAATAAAGTTCACTTAAAGTAGAC
1653136
1653137
GTTTTAGTTTCTTGTCGTTATTAC
AAAGTCTATTTTTATTTTATCTTTATCTATCAGC
1653194
1653195
GTTTTAGTTTCTTGTCGTTATTAC
ATTGGATAGTCAGTACCAAAAGGTACATTAAGCCACT
1653255
1653256
GTTTTAGTTTCTTGTCGTTATTAC
ATCATTAATAGAATACGAAAAGCTAAAAGCAAAAAA
1653315
1653316
GTTTTAGTTTCTTGTCGTTATTAC
ATGTAGATAACATCACTATATTGATAAAGAGACTCGT
1653376
1653377
GTTTTAGTTTCTTGTCGTTATTAC
AAAATCATTGAACTATAATGTAGATCTTGCAGTA
1653434
1653435
GTTTTAGTTTCTTGTCGTTATTAC
TTTCCAGCCCAGCCTCTTTGCAGCTTCTAGCCTAT
1653493
1653494
GTTTTAGTTTCTTGTCGTTATTAC
ATCTAGTGAGACAAAAAGAACCTCAGTCTCAGAGTT
1653553
1653554
GTTTTAGTTTCTTGTCGTTATTAC
TTCCTTATACACATCAAGTAACACAGGCGAGTTCATC
1653614
1653615
GTTTTAGTTTCTTGTCGTTATTAC
TGCGGGATACTACTTCGCCCCAAGTTCTGTAAAGAC
1653674
1653675
GTTTTAGTTTCTTGTCGTTATTAC
TGGTGAACTGGTACAGATACATCCTTATGAAGAA
1653732
1653733
GTTTTAGTTTCTTGTCGTTATTAC
CCATTACTGGACAAAGACTATGTCATCACAGCTGGTG
1653793
1653794
GTTTTAGTTTCTTGTCGTTATTAC
TTAACACTGGTTGAATTCGCAAGGAAAGTGATAGGT
1653853
1653854
GTTTTAGTTTCTTGTCGTTATTAC
AGATATTTAGCGTTAAAACTGCAGGAGACAGGGGCAC
1653914
1653915
GTTTTAGTTTCTTGTCGTTATTAC
AAGTTTTTGATATCTGTCCCTGCAGTGTCTAGTG
1653972
1653973
GTTTTAGTTTCTTGTCGTTATTAC
CTTCATACTCATACCAATTGTAAGTGTTTCCTTGTGTTGA
1654036
1654037
GTTTTAGTTTCTTGTCGTTATTAC
TCTTGGAAAGACCTTAAAAAAAGGATTGATTTATT
1654095
1654096
GTTTTAGTTTCTTGTCGTTATTAC
TCGCATGCCTTAAATCGATCGTTTTCTCTACATCT
1654154
1654155
GTTTTAGTTTCTTGTCGTTATTAC
TACGCTCCATGCCCAGCTGTGCTCTCATCAACACATAG
1654216
1654217
GTTTTAGTTTCTTGTCGTTATTAC
GCGAGAAAGACTTCTACTGGGGCGCCGAATTTAAC
1654275
1654276
GTTTTAGTTTCTTGTCGTTATTAC
ATCGCTGAGATCCTAGCGACTTTCTACCTGCCCGAT
1654335
1654336
GTTTTAGTTTCTTGTCGTTATTAC
CGCTAAAGAACGCCCTAAGGGAAGCCTTCAAATA
1654393
1654394
GTTTTAGTTTCTTGTCGTTATTAC
TATCGCCTCACGCCATCTCTTTGGCGTGGTATAAT
1654452
1654453
GTTTTAGTTTCTTGTCGTTATTAC
AAGTCGCAAAAGAACTGCTAGACAAATTTGACAGTGAA
1654514
1654515
GTTTTAGTTTCTTGTCGTTATTAC
TGACTTATTTTTTGTCTTAACTTCACTACTCATTTTCT
1654576
1654577
GTTTTAGTTTCTTGTCGTTATTAC
AAAGAACTCATTATCTTTAAGGACAAAGTCAGGGGT
1654636
1654637
GTTTTAGTTTCTTGTCGTTATTAC
TTCCCCTGCGGATACTTCTGCCTCAATTTGGTCACA
1654696
1654697
GTTTTAGTTTCTTGTCGTTATTAC
AAACCTTTTCAGAGGCTTACCTCATCAATGTGGAA
1654755
1654756
GTTTTAGTTTCTTGTCGTTATTAC
AAAGAAAAAGAAAAGGCGGGGGCGAGGGCATGGA
1654813
1654814
GTTTTAGTTTCTTGTCGTTATTAC
TCTGTGTAACGTATCAGCAATGCGCTTTGTTATAT
1654872
1654873
GTTTTAGTTTCTTGTCGTTATTAC
GCGGATTTCCACTGTTTCCAGCCTGAGCTTGGGC
1654930
1654931
GTTTTAGTTTCTTGTCGTTATTAC
AGCAAATTTTTAACAAATGTATTCCATTCTTGAAGT
1654990
1654991
GTTTTAGTTTCTTGTCGTTATTAC
AATTTTATAATGTCTGTAAAACTAAAACATTGTTTT
1655050
1655051
GTTTTAGTTTCTTGTCGTTATTAC
AAGGGATCTAGCCTGGCTAGAGAGCTTGCCGCTTTAATTAA
1655115
1655116
GTTTTAGTTTCTTGTCGTTATTAC
ATGGGTGCACCACCAGAAGTAGTAGAAGAGGTCGAG
1655175
1655176
GTTTTAGTTTCTTGTCGTTATTAC
TGTATTGCCCACAATGTCCCGTTTTCGTTGTACAGG
1655235
1655236
GTTTTAGTTTCTTGTCGTTATTAC
CAAGAGAAAGGAGCTAGGAAGAGGATCTTTTCCCT
1655294
1655295
GTTTTAGTTTCTTGTCGTTATTAC
ATTAGGACTCGAAAAATTTATATAAAAAAAGACATT
1655354
1655355
GTTTTAGTTTCTTGTCGTTATTAC
TTCTCATCAACATTTGCTGTACAAATTTCATAATCAT
1655415
1655416
GTTTTAGTTTCTTGTCGTTATTAC
ACCAGTCTTACTCAACAAGTCAGCCCTTACTTATAAT
1655476
1655477
GTTTTAGTTTCTTGTCGTTATTAC
CTCAGTCAGATACGTCTTCTTTAGCTGGCTTATGT
1655535
1655536
GTTTTAGTTTCTTGTCGTTATTAC
ATCGAGTGGAAGGCGTTAGACCCAGTAGCTGCCGC
1655594
1655595
GTTTTAGTTTCTTGTCGTTATTAC
AGCCTGGATCTGAAGAAACATAACCATGAGATAT
1655652
1655653
GTTTTAGTTTCTTGTCGTTATTAC
AGGTCAGGAATATAGATTATTCGTACTTTGCTAT
1655710
1655711
GTTTTAGTTTCTTGTCGTTATTAC
AAGTCTTCAGAAAATCATCAACACGCATATACTG
1655768
1655769
GTTTTAGTTTCTTGTCGTTATTAC
TTTGATTAAAATGGGTTGGTATGGCATAAAAAAT
1655826
1655827
GTTTTAGTTTCTTGTCGTTATTAC
ATCGGAATTATAGGCGGATTTTTAACAATATTCCTAACAT
1655890
1655891
GTTTTAGTTTCTTGTCGTTATTAC
GGAGACAAAGTTTGTCTGTGCAATATATCCCAA
1655947
1655948
GTTTTAGTTTCTTGTCGTTATTAC
AGAAAGAGGAACATAAGGTCTAGATCTTACCCAA
1656005
1656006
GTTTTAGTTTCTTGTCGTTATTAC
TAATTCATCTTTATAGTGTAACTTTTTGAAATAAA
1656064
1656065
GTTTTAGTTTCTTGTCGTTATTAC
AACTAAGAAAAATTCAGTCAGCAGTATTAACTACTACTA
1656127
1656128
GTTTTAGTTTCTTGTCGTTATTAC
TACACCAGTGAGAATGTCTTCCCGAAACTACAAGAA
1656187
1656188
GTTTTAGTTTCTTGTCGTTATTAC
AATTGGCAACTAAGAAGTTTGTACAAATAACATAA
1656246
1656247
GTTTTAGTTTCTTGTCGTTATTAC
GAATAGGGGATGCGATAAACCAGTTAGCACAACAA
1656305
1656306
GTTTTAGTTTCTTGTCGTTATTAC
GGCATATAGAATTTTTCGCTTTGTTGCCTCTTTAA
1656364
1656365
GTTTTAGTTTCTTGTCGTTATTAC
ATTCAATTTTTTTCGTTTTGTCGGTGAAAATAAAA
1656423
1656424
GTTTTAGTTTCTTGTCGTTATTAC
GCTTGTGGTAACTATTCCATCGTCATCAGCAATC
1656481
1656482
GTTTTAGTTTCTTGTCGTTATTAC
AACGCATTATTGCTAATGCACGGTGCTAACAATCTAG
1656542
1656543
GTTTTAGTTTCTTGTCGTTATTAC
GTTTAAAACGGTAAATAGATAAAACCAAGAAAATG
1656601
1656602
GTTTTAGTTTCTTGTCGTTATTAC
ACGTCTTGTGCTGACTTGTAAACATCGCTGTTCTT
1656660
1656661
GTTTTAGTTTCTTGTCGTTATTAC
AAAGAAGTGCAAAAAAATGGCTACGGTGTACATT
1656718
1656719
GTTTTAGTTTCTTGTCGTTATTAC
ATGCATTCATTAAAGACTTAACAATTCAAGAGTT
1656776
1656777
GTTTTAGTTTCTTGTCGTTATTAC
AAGTTTCTTAATTTATTACAGTTATATGAACAGC
1656834
1656835
GTTTTAGTTTCTTGTCGTTATTAC
ACAATAGCCCGCAAATGTCAGTATCATCACGTTGTT
1656894
1656895
GTTTTAGTTTCTTGTCGTTATTAC
AGATTTTATGAAACATTAACTATTTATTTTATCTAT
1656954
1656955
GTTTTAGTTTCTTGTCGTTATTAC
ATTAATCAGATAGAAACTAGCAGTGTTTTTTATGTT
1657014
1657015
GTTTTAGTTTCTTGTCGTTATTAC
ACCTTCACTTATTGAAGATGGGGCTGAAACAACTTT
1657074
1657075
GTTTTAGTTTCTTGTCGTTATTAC
TTGGTTACTGATATTTTCTGAACTCCAGCAAATGT
1657133
1657134
GTTTTAGTTTCTTGTCGTTATTAC
CGTTAAACAGACTAGGCTCAGGACAAGCATTCACT
1657192
1657193
GTTTTAGTTTCTTGTCGTTATTAC
AGCCCAAATCTGTTATCTCTTTAGAATGAAATTTT
1657251
1657252
GTTTTAGTTTCTTGTCGTTATTAC
AGAGTACCTTTACCTAACCAGAGCGTCGTATATTAT
1657311
1657312
GTTTTAGTTTCTTGTCGTTATTAC
TGTAGTCTTGCGCAATACCTGCGCTCTTTAGCAGT
1657370
1657371
GTTTTAGTTTCTTGTCGTTATTAC
AGAAGCTATACAACGAGGCTATATAAATAAAATG
1657428
1657429
GTTTTAGTTTCTTGTCGTTATTAC
GTGAAGATGTCGATAGTGACGATAGCTGAGATAGT
1657487
1657488
GTTTTAGTTTCTTGTCGTTATTAC
AAAGTAAGCCCGATAGTCCTTAGGTCAGGATCCCTTTA
1657549
1657550
GTTTTAGTTTCTTGTCGTTATTAC
TATATTTGGTCAAGTGTTTCTACAGCATTTTAAT
1657607
1657608
GTTTTAGTTTCTTGTCGTTATTAC
GCAGAGTCTTTCGCTACGTCTTTCAGCGTCTCAAA
1657666
1657667
GTTTTAGTTTCTTGTCGTTATTAC
GATCACAGTAATGCGTTATATAAAAAGGCAGAATTCA
1657727
1657728
GTTTTAGTTTCTTGTCGTTATTAC
CTTTGATCAATTACTAAATTCTGTAATTGTGCCTCTA
1657788
1657789
GTTTTAGTTTCTTGTCGTTATTAC
GTAGAAAGTCATAACCCAAAACTTCATTTTTTTGTT
1657848
1657849
GTTTTAGTTTCTTGTCGTTATTAC
ACAGGCTGTACCAAGCTGTTAGCGATGTAGTTAAT
1657907
1657908
GTTTTAGTTTCTTGTCGTTATTAC
AGCTCCCATTAAAATCACGACCACTCCAAATATCA
1657966
1657967
GTTTTAGTTTCTTGTCGTTATTAC
AGTTATAATCTATCTCCGGAACATTAAAATATTTTA
1658026
1658027
GTTTTAGTTTCTTGTCGTTATTAC
ATAGTTGGTGGGACGGAATGGAGAAACAGCTAAAA
1658085
1658086
GTTTTAGTTTCTTGTCGTTATTAC
TATAAAAAAGCATTTGCACAGTCTTGGAAACCACTATTT
1658148
1658149
GTTTTAGTTTCTTGTCGTTATTAC
ATGCTCGCCCACCAGCACACCGGACAGATCGACATA
1658208
1658209
GTTTTAGTTTCTTGTCGTTATTAC
AACTGAAGGAACCTTGTAGAGCGGTATGCTTTGCTTCTTCTC
1658274
1658275
GTTTTAGTTTCTTGTCGTTATTAC
AACTGGAGCAACGTATTGTTGAATATAGCCCCTATGA
1658335
1658336
GTTTTAGTTTCTTGTCGTTATTAC
AATGAGATATTCACTGAGGTCATGGAGCGTGAAA
1658393
1658394
GTTTTAGTTTCTTGTCGTTATTAC
TTTCCTTATTTTTTAACGAGGGAAATGGTCAGGCTAAAA
1658456
1658457
GTTTTAGTTTCTTGTCGTTATTAC
TACGGTAAACTGGGGAGTTAACTCAGCATCCA
1658512
1658513
GTTTTAGTTTCTTGTCGTTATTAC
CTTTCGCATACTTCCTCGCCCTCCTTGAGATATTTTCT
1658574
1658575
GTTTTAGTTTCTTGTCGTTATTAC
1658598
Left flanking sequence : Till position 1650673 (length
bp)
ACCACACAAGGGACACGTTATAACCCTACATAAGCGATAACATTTGGGACGTAAAATTTTGCTTCAAAAT
TAATATATGTGTCATGATATTTTACATGGA
Right flanking sequence : From position 1658598 (length
bp)
TGATCCTTGCCTCCATCAATTTTACATTCTTATTTCCTGGTTTATAAATATTTTCTCTCCTTCATTGTCA
ATTTTGTGCCCTTAGGTACGGAAGGGAGTT
Print the CRISPR sequence : From position
bp To position
bp