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CRISPRs details
NC_020247_1
Flanking alignement tool
Page manual
  
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NC_020247_1                                                                                                                 
top
Strain :
Sulfolobus acidocaldarius Ron12/I
RefSeq :
NC_020247 (chromosome circular)
CRISPR id :
NC_020247_1
DR consensus (24 bp) :
GTTTTAGTTTCTTGTCGTTATTAC
Number of repetitions :
133
Begin Position :
1648592
End Position :
1656517
1648592
GTTTTAGTTTCTTGTCGTTATTAC
ATCATTGGAATTGGGCTAGCCCTATTTTTCTTGATA
1648651
1648652
GTTTTAGTTTCTTGTCGTTATTAC
AGTTGGTAGTGGGCAGATATCTAGCCCTGACCACT
1648710
1648711
GTTTTAGTTTCTTGTCGTTATTAC
TGATGTCGAATACCGGAGTCAAGATGTTGATGAAAA
1648770
1648771
GTTTTAGTTTCTTGTCGTTATTAC
AAATAACGAAGATTTAAGTGGTTTTGAACCAAGAGAA
1648831
1648832
GTTTTAGTTTCTTGTCGTTATTAC
TGATCACATGTTTTATCGGTAGTACATAATGTAGAAA
1648892
1648893
GTTTTAGTTTCTTGTCGTTATTAC
GAGGAGTTTGATAAACTTTTGGAATTTCTTGAGAG
1648951
1648952
GTTTTAGTTTCTTGTCGTTATTAC
GAAATATAGCAAGAGTTCTGTGGTCGCTATATTA
1649009
1649010
GTTTTAGTTTCTTGTCGTTATTAC
ATCATTAGCACGATATTTCATCATCACTGCAGTAATC
1649070
1649071
GTTTTAGTTTCTTGTCGTTATTAC
CTCAAAAATATAATGCGTAAGCTTAAATACCCAAC
1649129
1649130
GTTTTAGTTTCTTGTCGTTATTAC
TTTTTATTCTATATTTGAATAAAGCATAAAGTAATC
1649189
1649190
GTTTTAGTTTCTTGTCGTTATTAC
CTAATATTAATGGCAGTAGAAGTCTCGAACAACAC
1649248
1649249
GTTTTAGTTTCTTGTCGTTATTAC
TATCTCGCAATAAATGAGAGAGAGTCGGCGAGTGT
1649307
1649308
GTTTTAGTTTCTTGTCGTTATTAC
TATGTTTGTTGTATTGCTAGCGTAATATTGTATTACA
1649368
1649369
GTTTTAGTTTCTTGTCGTTATTAC
ACACAATATCTTAGTCATTACTGGAATGACTACAAC
1649428
1649429
GTTTTAGTTTCTTGTCGTTATTAC
ATCATTAGCACGATATTTCATCATCACTGCAGTAATC
1649489
1649490
GTTTTAGTTTCTTGTCGTTATTAC
TGTAGTAAATTGATATAATCGGATTGAAGAGAGTG
1649548
1649549
GTTTTAGTTTCTTGTCGTTATTAC
AGGGATATCTGGAAGTAATACACCAGTACTATAC
1649606
1649607
GTTTTAGTTTCTTGTCGTTATTAC
GCCATTCAACTCAAAACTTATAGAAGATTACGAAATA
1649667
1649668
GTTTTAGTTTCTTGTCGTTATTAC
CCAAATGCTAAAAATAGAAAAGGTAGGAGAGTTATTA
1649728
1649729
GTTTTAGTTTCTTGTCGTTATTAC
CGGTCTTCCAAAATTACTTAATGCTCTTGATAATAAA
1649789
1649790
GTTTTAGTTTCTTGTCGTTATTGC
TAAGGCTAATTTTGATCGATAAAGATGAAGAAGAAAG
1649850
1649851
GTTTTAGTTTCTTGTCGTTATTAC
TATCTAACCCTCTCTTTTTCAACTCTTTGAAGATAAAA
1649912
1649913
GTTTTAGTTTCTTGTCGTTATTAC
CCTCCCTGATATTCACCTTCTCCATTTCCTGTAGCAA
1649973
1649974
GTTTTAGTTTCTTGTCGTTATTAC
ACCAACTCTCAATTACTCATAATATTCAAACTAAAT
1650033
1650034
GTTTTAGTTTCTTGTCGTTATTAC
ATTCCGACTTGCTTAAATTCAGCTTTTTTGTACAA
1650092
1650093
GTTTTAGTTTCTTGTCGTTATTAC
ACAGTAGTAGCTCCGGCTGTCATTCCTAATAATAT
1650151
1650152
GTTTTAGTTTCTTGTCGTTATTAC
AAATGATATAAAAAATGAACAACAGAATATAAAA
1650209
1650210
GTTTTAGTTTCTTGTCGTTATTAC
AACAAGAATTGATGAAGTATTCAAAAGAGCGATATGAA
1650271
1650272
GTTTTAGTTTCTTGTCGTTATTAC
CTTTCAGAGGGCGAGATCGCAGAGTACTTGAGAATAGCG
1650334
1650335
GTTTTAGTTTCTTGTCGTTATTAC
ATTTCTGCAAATGTATAATACATCAATTTTATAAT
1650393
1650394
GTTTTAGTTTCTTGTCGTTATTAC
GCATCAGCAATTATGGAAGTCGCTAGATATTACTA
1650452
1650453
GTTTTAGTTTCTTGTCGTTATTAC
AGGAATGTGTACAACAGCTATAAAAAAAGAAAGAATTGT
1650515
1650516
GTTTTAGTTTCTTGTCGTTATTAC
TTTGGAATATCTTGCGAGGCGAGGGTGAGTGAACCT
1650575
1650576
GTTTTAGTTTCTTGTCGTTATTAC
AATAAAAGGAGATTTCATAGACTCTATTCTCAAAA
1650634
1650635
GTTTTAGTTTCTTGTCGTTATTAC
TTGTTCTAGAAGTGGCGCATTAAACGGCAGTTTTTG
1650694
1650695
GTTTTAGTTTCTTGTCGTTATTAC
GAGAGACAAAATTTCCAAGTAAGTGACTCTGAAAATT
1650755
1650756
GTTTTAGTTTCTTGTCGTTATTAC
AATATACGCTGCATAATATACGCTCTCTTACGCTAAG
1650816
1650817
GTTTTAGTTTCTTGTCGTTATTAC
AGAGTGGCATACCTTATTTGTTTTGTTGAGTTATGAAG
1650878
1650879
GTTTTAGTTTCTTGTCGTTATTAC
TTCCATTTTCTTCATAAGTAGCATCTCTCAACAAT
1650937
1650938
GTTTTAGTTTCTTGTCGTTATTAC
ATAACAATTGTCGGTAACTTATTTAGACGCTTA
1650994
1650995
GTTTTAGTTTCTTGTCGTTATTAC
TTTGATACGATTACAATAAAGTTCACTTAAAGTAGAC
1651055
1651056
GTTTTAGTTTCTTGTCGTTATTAC
AAAGTCTATTTTTATTTTATCTTTATCTATCAGC
1651113
1651114
GTTTTAGTTTCTTGTCGTTATTAC
ATTGGATAGTCAGTACCAAAAGGTACATTAAGCCACT
1651174
1651175
GTTTTAGTTTCTTGTCGTTATTAC
ATCATTAATAGAATACGAAAAGCTAAAAGCAAAAAA
1651234
1651235
GTTTTAGTTTCTTGTCGTTATTAC
ATGTAGATAACATCACTATATTGATAAAGAGACTCGT
1651295
1651296
GTTTTAGTTTCTTGTCGTTATTAC
AAAATCATTGAACTATAATGTAGATCTTGCAGTA
1651353
1651354
GTTTTAGTTTCTTGTCGTTATTAC
TTTCCAGCCCAGCCTCTTTGCAGCTTCTAGCCTAT
1651412
1651413
GTTTTAGTTTCTTGTCGTTATTAC
ATCTAGTGAGACAAAAAGAACCTCAGTCTCAGAGTT
1651472
1651473
GTTTTAGTTTCTTGTCGTTATTAC
TTCCTTATACACATCAAGTAACACAGGCGAGTTCATC
1651533
1651534
GTTTTAGTTTCTTGTCGTTATTAC
TGCGGGATACTACTTCGCCCCAAGTTCTGTAAAGAC
1651593
1651594
GTTTTAGTTTCTTGTCGTTATTAC
TGGTGAACTGGTACAGATACATCCTTATGAAGAA
1651651
1651652
GTTTTAGTTTCTTGTCGTTATTAC
CCATTACTGGACAAAGACTATGTCATCACAGCTGGTG
1651712
1651713
GTTTTAGTTTCTTGTCGTTATTAC
TTAACACTGGTTGAATTCGCAAGGAAAGTGATAGGT
1651772
1651773
GTTTTAGTTTCTTGTCGTTATTAC
AGATATTTAGCGTTAAAACTGCAGGAGACAGGGGCAC
1651833
1651834
GTTTTAGTTTCTTGTCGTTATTAC
AAGTTTTTGATATCTGTCCCTGCAGTGTCTAGTG
1651891
1651892
GTTTTAGTTTCTTGTCGTTATTAC
CTTCATACTCATACCAATTGTAAGTGTTTCCTTGTGTTGA
1651955
1651956
GTTTTAGTTTCTTGTCGTTATTAC
TCTTGGAAAGACCTTAAAAAAAGGATTGATTTATT
1652014
1652015
GTTTTAGTTTCTTGTCGTTATTAC
TCGCATGCCTTAAATCGATCGTTTTCTCTACATCT
1652073
1652074
GTTTTAGTTTCTTGTCGTTATTAC
TACGCTCCATGCCCAGCTGTGCTCTCATCAACACATAG
1652135
1652136
GTTTTAGTTTCTTGTCGTTATTAC
GCGAGAAAGACTTCTACTGGGGCGCCGAATTTAAC
1652194
1652195
GTTTTAGTTTCTTGTCGTTATTAC
ATCGCTGAGATCCTAGCGACTTTCTACCTGCCCGAT
1652254
1652255
GTTTTAGTTTCTTGTCGTTATTAC
CGCTAAAGAACGCCCTAAGGGAAGCCTTCAAATA
1652312
1652313
GTTTTAGTTTCTTGTCGTTATTAC
TATCGCCTCACGCCATCTCTTTGGCGTGGTATAAT
1652371
1652372
GTTTTAGTTTCTTGTCGTTATTAC
AAGTCGCAAAAGAACTGCTAGACAAATTTGACAGTGAA
1652433
1652434
GTTTTAGTTTCTTGTCGTTATTAC
TGACTTATTTTTTGTCTTAACTTCACTACTCATTTTCT
1652495
1652496
GTTTTAGTTTCTTGTCGTTATTAC
AAAGAACTCATTATCTTTAAGGACAAAGTCAGGGGT
1652555
1652556
GTTTTAGTTTCTTGTCGTTATTAC
TTCCCCTGCGGATACTTCTGCCTCAATTTGGTCACA
1652615
1652616
GTTTTAGTTTCTTGTCGTTATTAC
AAACCTTTTCAGAGGCTTACCTCATCAATGTGGAA
1652674
1652675
GTTTTAGTTTCTTGTCGTTATTAC
AAAGAAAAAGAAAAGGCGGGGGCGAGGGCATGGA
1652732
1652733
GTTTTAGTTTCTTGTCGTTATTAC
TCTGTGTAACGTATCAGCAATGCGCTTTGTTATAT
1652791
1652792
GTTTTAGTTTCTTGTCGTTATTAC
GCGGATTTCCACTGTTTCCAGCCTGAGCTTGGGC
1652849
1652850
GTTTTAGTTTCTTGTCGTTATTAC
AGCAAATTTTTAACAAATGTATTCCATTCTTGAAGT
1652909
1652910
GTTTTAGTTTCTTGTCGTTATTAC
AATTTTATAATGTCTGTAAAACTAAAACATTGTTTT
1652969
1652970
GTTTTAGTTTCTTGTCGTTATTAC
AAGGGATCTAGCCTGGCTAGAGAGCTTGCCGCTTTAATTAA
1653034
1653035
GTTTTAGTTTCTTGTCGTTATTAC
ATGGGTGCACCACCAGAAGTAGTAGAAGAGGTCGAG
1653094
1653095
GTTTTAGTTTCTTGTCGTTATTAC
TGTATTGCCCACAATGTCCCGTTTTCGTTGTACAGG
1653154
1653155
GTTTTAGTTTCTTGTCGTTATTAC
CAAGAGAAAGGAGCTAGGAAGAGGATCTTTTCCCT
1653213
1653214
GTTTTAGTTTCTTGTCGTTATTAC
ATTAGGACTCGAAAAATTTATATAAAAAAAGACATT
1653273
1653274
GTTTTAGTTTCTTGTCGTTATTAC
TTCTCATCAACATTTGCTGTACAAATTTCATAATCAT
1653334
1653335
GTTTTAGTTTCTTGTCGTTATTAC
ACCAGTCTTACTCAACAAGTCAGCCCTTACTTATAAT
1653395
1653396
GTTTTAGTTTCTTGTCGTTATTAC
CTCAGTCAGATACGTCTTCTTTAGCTGGCTTATGT
1653454
1653455
GTTTTAGTTTCTTGTCGTTATTAC
ATCGAGTGGAAGGCGTTAGACCCAGTAGCTGCCGC
1653513
1653514
GTTTTAGTTTCTTGTCGTTATTAC
AGCCTGGATCTGAAGAAACATAACCATGAGATAT
1653571
1653572
GTTTTAGTTTCTTGTCGTTATTAC
AGGTCAGGAATATAGATTATTCGTACTTTGCTAT
1653629
1653630
GTTTTAGTTTCTTGTCGTTATTAC
AAGTCTTCAGAAAATCATCAACACGCATATACTG
1653687
1653688
GTTTTAGTTTCTTGTCGTTATTAC
TTTGATTAAAATGGGTTGGTATGGCATAAAAAAT
1653745
1653746
GTTTTAGTTTCTTGTCGTTATTAC
ATCGGAATTATAGGCGGATTTTTAACAATATTCCTAACAT
1653809
1653810
GTTTTAGTTTCTTGTCGTTATTAC
GGAGACAAAGTTTGTCTGTGCAATATATCCCAA
1653866
1653867
GTTTTAGTTTCTTGTCGTTATTAC
AGAAAGAGGAACATAAGGTCTAGATCTTACCCAA
1653924
1653925
GTTTTAGTTTCTTGTCGTTATTAC
TAATTCATCTTTATAGTGTAACTTTTTGAAATAAA
1653983
1653984
GTTTTAGTTTCTTGTCGTTATTAC
AACTAAGAAAAATTCAGTCAGCAGTATTAACTACTACTA
1654046
1654047
GTTTTAGTTTCTTGTCGTTATTAC
TACACCAGTGAGAATGTCTTCCCGAAACTACAAGAA
1654106
1654107
GTTTTAGTTTCTTGTCGTTATTAC
AATTGGCAACTAAGAAGTTTGTACAAATAACATAA
1654165
1654166
GTTTTAGTTTCTTGTCGTTATTAC
GAATAGGGGATGCGATAAACCAGTTAGCACAACAA
1654224
1654225
GTTTTAGTTTCTTGTCGTTATTAC
GGCATATAGAATTTTTCGCTTTGTTGCCTCTTTAA
1654283
1654284
GTTTTAGTTTCTTGTCGTTATTAC
ATTCAATTTTTTTCGTTTTGTCGGTGAAAATAAAA
1654342
1654343
GTTTTAGTTTCTTGTCGTTATTAC
GCTTGTGGTAACTATTCCATCGTCATCAGCAATC
1654400
1654401
GTTTTAGTTTCTTGTCGTTATTAC
AACGCATTATTGCTAATGCACGGTGCTAACAATCTAG
1654461
1654462
GTTTTAGTTTCTTGTCGTTATTAC
GTTTAAAACGGTAAATAGATAAAACCAAGAAAATG
1654520
1654521
GTTTTAGTTTCTTGTCGTTATTAC
ACGTCTTGTGCTGACTTGTAAACATCGCTGTTCTT
1654579
1654580
GTTTTAGTTTCTTGTCGTTATTAC
AAAGAAGTGCAAAAAAATGGCTACGGTGTACATT
1654637
1654638
GTTTTAGTTTCTTGTCGTTATTAC
ATGCATTCATTAAAGACTTAACAATTCAAGAGTT
1654695
1654696
GTTTTAGTTTCTTGTCGTTATTAC
AAGTTTCTTAATTTATTACAGTTATATGAACAGC
1654753
1654754
GTTTTAGTTTCTTGTCGTTATTAC
ACAATAGCCCGCAAATGTCAGTATCATCACGTTGTT
1654813
1654814
GTTTTAGTTTCTTGTCGTTATTAC
AGATTTTATGAAACATTAACTATTTATTTTATCTAT
1654873
1654874
GTTTTAGTTTCTTGTCGTTATTAC
ATTAATCAGATAGAAACTAGCAGTGTTTTTTATGTT
1654933
1654934
GTTTTAGTTTCTTGTCGTTATTAC
ACCTTCACTTATTGAAGATGGGGCTGAAACAACTTT
1654993
1654994
GTTTTAGTTTCTTGTCGTTATTAC
TTGGTTACTGATATTTTCTGAACTCCAGCAAATGT
1655052
1655053
GTTTTAGTTTCTTGTCGTTATTAC
CGTTAAACAGACTAGGCTCAGGACAAGCATTCACT
1655111
1655112
GTTTTAGTTTCTTGTCGTTATTAC
AGCCCAAATCTGTTATCTCTTTAGAATGAAATTTT
1655170
1655171
GTTTTAGTTTCTTGTCGTTATTAC
AGAGTACCTTTACCTAACCAGAGCGTCGTATATTAT
1655230
1655231
GTTTTAGTTTCTTGTCGTTATTAC
TGTAGTCTTGCGCAATACCTGCGCTCTTTAGCAGT
1655289
1655290
GTTTTAGTTTCTTGTCGTTATTAC
AGAAGCTATACAACGAGGCTATATAAATAAAATG
1655347
1655348
GTTTTAGTTTCTTGTCGTTATTAC
GTGAAGATGTCGATAGTGACGATAGCTGAGATAGT
1655406
1655407
GTTTTAGTTTCTTGTCGTTATTAC
AAAGTAAGCCCGATAGTCCTTAGGTCAGGATCCCTTTA
1655468
1655469
GTTTTAGTTTCTTGTCGTTATTAC
TATATTTGGTCAAGTGTTTCTACAGCATTTTAAT
1655526
1655527
GTTTTAGTTTCTTGTCGTTATTAC
GCAGAGTCTTTCGCTACGTCTTTCAGCGTCTCAAA
1655585
1655586
GTTTTAGTTTCTTGTCGTTATTAC
GATCACAGTAATGCGTTATATAAAAAGGCAGAATTCA
1655646
1655647
GTTTTAGTTTCTTGTCGTTATTAC
CTTTGATCAATTACTAAATTCTGTAATTGTGCCTCTA
1655707
1655708
GTTTTAGTTTCTTGTCGTTATTAC
GTAGAAAGTCATAACCCAAAACTTCATTTTTTTGTT
1655767
1655768
GTTTTAGTTTCTTGTCGTTATTAC
ACAGGCTGTACCAAGCTGTTAGCGATGTAGTTAAT
1655826
1655827
GTTTTAGTTTCTTGTCGTTATTAC
AGCTCCCATTAAAATCACGACCACTCCAAATATCA
1655885
1655886
GTTTTAGTTTCTTGTCGTTATTAC
AGTTATAATCTATCTCCGGAACATTAAAATATTTTA
1655945
1655946
GTTTTAGTTTCTTGTCGTTATTAC
ATAGTTGGTGGGACGGAATGGAGAAACAGCTAAAA
1656004
1656005
GTTTTAGTTTCTTGTCGTTATTAC
TATAAAAAAGCATTTGCACAGTCTTGGAAACCACTATTT
1656067
1656068
GTTTTAGTTTCTTGTCGTTATTAC
ATGCTCGCCCACCAGCACACCGGACAGATCGACATA
1656127
1656128
GTTTTAGTTTCTTGTCGTTATTAC
AACTGAAGGAACCTTGTAGAGCGGTATGCTTTGCTTCTTCTC
1656193
1656194
GTTTTAGTTTCTTGTCGTTATTAC
AACTGGAGCAACGTATTGTTGAATATAGCCCCTATGA
1656254
1656255
GTTTTAGTTTCTTGTCGTTATTAC
AATGAGATATTCACTGAGGTCATGGAGCGTGAAA
1656312
1656313
GTTTTAGTTTCTTGTCGTTATTAC
TTTCCTTATTTTTTAACGAGGGAAATGGTCAGGCTAAAA
1656375
1656376
GTTTTAGTTTCTTGTCGTTATTAC
TACGGTAAACTGGGGAGTTAACTCAGCATCCA
1656431
1656432
GTTTTAGTTTCTTGTCGTTATTAC
CTTTCGCATACTTCCTCGCCCTCCTTGAGATATTTTCT
1656493
1656494
GTTTTAGTTTCTTGTCGTTATTAC
1656517
Left flanking sequence : Till position 1648592 (length
bp)
ACCACACAAGGGACACGTTATAACCCTACATAAGCGATAACATTTGGGACGTAAAATTTTGCTTCAAAAT
TAATATATGTGTCATGATATTTTACATGGA
Right flanking sequence : From position 1656517 (length
bp)
TGATCCTTGCCTCCATCAATTTTACATTCTTATTTCCTGGTTTATAAATATTTTCTCTCCTTCATTGTCA
ATTTTGTGCCCTTAGGTACGGAAGGGAGTT
Print the CRISPR sequence : From position
bp To position
bp