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NZ_AP012326_11
Flanking alignement tool
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NZ_AP012326_11                                                                                                                 
top
Strain :
Bifidobacterium dentium JCM 1195 = DSM 20436 GCF_001042595
RefSeq :
NZ_AP012326 (chromosome circular)
CRISPR id :
NZ_AP012326_11
DR consensus (33 bp) :
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
Number of repetitions :
81
Begin Position :
1831393
End Position :
1836770
1831393
TGTTTTAATCTCACTCTCCGTGAGGAGAGCGAC
CACCAGGGCCGACGGGGGACCGGGAGCTCGGCGT
1831459
1831460
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TGCATGAGCGCGTAGCAGCCCTCCAGGCTGTCCTC
1831527
1831528
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TCGCCGAGAACGACAGCGGACTCTTCGATCGGAA
1831594
1831595
ATTTCAATCCACGCTCTCCGTGAGGAAAGCGAC
AAGAGTGTAGTCGTTGCCGCATGCCACGTCGGT
1831660
1831661
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
ATTGCTCCCTGCGGATGTCGGTGTGCGCGTGCATA
1831728
1831729
TTTCAAATCCACGCTCTCCGTGAGGAGAGCGAC
CCTCCATGCACTTTCGCCTTGACTTCACGGCTCAT
1831796
1831797
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TGGGCTATCCTCAACCTCAGGGCAATGGAACATGA
1831864
1831865
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GTGATGTTCTCCGCTATCTCACGTTCCAAATCG
1831930
1831931
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GGCGCTGATGCCTCCGCCGATGTCGCCGGACAG
1831996
1831997
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
ATGTCTTGCTCCCCGTGCCGTTGACGCCGGTGAG
1832063
1832064
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GCCGCCTGATGGCGGCGAATACCCGTCCTTGTC
1832129
1832130
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GCATGTCATCGACTGCGACCTGCGTCATCACGT
1832195
1832196
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TGATACGCCGCGGATGCCGACGCTTGCCGTGTA
1832261
1832262
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TTTGCGGGTGATCTTGACCGTCGGCGCGAAAGC
1832327
1832328
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TTGGTATTATTTCGTCCAGACGTGCGATTACGT
1832393
1832394
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
AGGCCACGAGACGCGCATGCAGGGACTTTGCCAT
1832460
1832461
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CACGCCGACCTGATCACGGAACACTCTCGACGGA
1832527
1832528
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
ATAACCGTATGGTGGTTTGCCGACTATTTTGGCTT
1832595
1832596
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TGGTCTGCTGGTTCGAAAGGTTCGTGCTGGCCAAT
1832663
1832664
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CGGCGACAACGAGCCACTGTCCGGCATCAGTTATT
1832731
1832732
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GAAATGTATCTCCGTAGTTCGACCTGTCCGGAG
1832797
1832798
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GACGTGGACTCGACGCAGACGCAAGACCAACCA
1832863
1832864
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CCAGCTTGTGGACATCAGCGCCCGAGCCGTCCAC
1832930
1832931
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
ATGTTCGTCTTTTACCTGGGCCGCACCATGCGC
1832996
1832997
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GGGTACGCACTCTTTCGAGCCGATTTGCGGATAG
1833063
1833064
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GGTGGCGGCCGCACCGATCGCATTCGCCGCACCC
1833130
1833131
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TTGTTCCGTCTGCTCATGTTCACACCTTTCATAA
1833197
1833198
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GGGGATAATATGACCAACGTTCCGCAAATGGTTG
1833264
1833265
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CGGCATCTGCCTCATCGAATTGACATCCATCCTG
1833331
1833332
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GGCGAACAGGGTCGCGCTCACCTGTTCGTTGGT
1833397
1833398
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CCTACGCCGATTTCATGTCGCGTGAGGTCAAGGC
1833464
1833465
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GCCACCACGCAAGACTCGACAGCCACCGCAAGCAGT
1833533
1833534
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GGGGAGGCGACCATGGCGTTACGGACGCTCAAC
1833599
1833600
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GTAGCCGAGTACGGTAAGCGTATCACGGTATGA
1833665
1833666
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
ACGCGACCACCGACGCCATGGTCAGCCTGTTGAG
1833732
1833733
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CCGGATCCTGACCCACATGCAAACCGAAATCGAG
1833799
1833800
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CAACCCACGCGATTCCAGGCATATGGCCAGCAG
1833865
1833866
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TGGCTGATCAACGACCCCGTAGCCTACGATAAGGT
1833933
1833934
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CCAATTCGCCGGTCAATCCGATTGACGGCACCAG
1834000
1834001
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CAACTTCCATATCCCGGGCAGATACCGGCATTT
1834066
1834067
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TCTACAAGCGCAAGCAGGACTGCAAACGCATGGT
1834133
1834134
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TAGTAGTAGTAGGAGTAGTAGTAATAAGAAAGAA
1834200
1834201
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TTGGCGGAGGCTTCCACTTCCGCATCGGTGACGG
1834267
1834268
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GCAATCATCTTGCACCTTAAACACGTATTTGGT
1834333
1834334
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CGGCCTCCGCCGATGCTATTCGTTCGCGTGAGGC
1834400
1834401
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TCGACTGCACATGATGGCGGCGCGTAAGGTTGC
1834466
1834467
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GAAGCTGGTCCGGTCCACGTCGAATTTCACATC
1834532
1834533
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GTACAATACTTTTGATTTTTTAGGCTCCAAATCAT
1834600
1834601
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TGTCGTGTTGAGCAGTTTCGGCAATGGGTTTGT
1834666
1834667
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GGGTGCGACGGCCTATCTGACGGCGTACACGCC
1834732
1834733
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CCACCGCCGATAAGACTGATGATGACCGCCGACCA
1834800
1834801
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TTTTATATACGACGCGCCAGTTGCTCGTGGATGT
1834867
1834868
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TTTTTAAGGCGGTTATATCATGGCCCAGCATGTC
1834934
1834935
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GGTCGCATACGTCTTGGCAACTTCACTCTTAATG
1835001
1835002
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
ATCATCCAACGACGAATGCCAACACAAGGCAATC
1835068
1835069
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GGGTTACTGTGCATGCAAGCGCAAGCCGTCGCAGT
1835136
1835137
ATTTCAATCCACGCTCTCCCTGAGGAGAGCGAC
GGGAACTGCCCATCGACTGGGCCTACCGGGGTGA
1835203
1835204
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
AAATGGCGTGGGAAGAGCTCGGCTGGGGGCCGGA
1835270
1835271
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TGACGCGGCCACGGATCCTCATCTCCCAATCGGG
1835337
1835338
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
ATGAGCATCTGGCCGTCCGCGTCGCCGAGCTG
1835402
1835403
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
ACGGATTAGGGGTGATAGACCCCCTATGCTTGTA
1835469
1835470
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
ATTCGAGCGTATTGGCAAAACGCTGGATGACTTG
1835536
1835537
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CGGACTCGGCATCCCGAACCTGCCATTCAAAGCG
1835603
1835604
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TGGTGTGGGCATTGACATAATCGCATGTCTGGAT
1835670
1835671
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TGGCGCTGATGCCGCCGCCGATGTCGCCGGACAA
1835737
1835738
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TCGGTGATCCATTCCACGTGCGAGCTGCCGTCGTT
1835805
1835806
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CGGCTGATCCACGAATATGCGCGTGCTGCAGAGA
1835872
1835873
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GGATTCGAAGACTACTACGAGCAGCTCCTCCGA
1835938
1835939
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CTAACGTGTCCTCCATCACTTACAGGGACTTTAT
1836005
1836006
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GGCAGACTCAGGGCACCCTATCGGCATCGAATG
1836071
1836072
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CCACGCGCACCGTGGCTCGTACCGCTTCCCCGA
1836137
1836138
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GCGGCATTTGCCTCATCGAGCTCACCTCAATCCTT
1836205
1836206
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
GGTGCTGTTCCACGTCGGTGCGGCGCAAATAAAT
1836272
1836273
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CCAAACGATTCGGGCATGGTCGCGGTCGAGGAC
1836338
1836339
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
ACGCTTCATCCGACAGCACGTTCGTCATTTGCAG
1836405
1836406
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TTCCCGTCATGGTACGGGCGGTGGAAGTGTCAT
1836471
1836472
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TGTATACGGTAGCCATTGTTTAGTCCTTTTCTC
1836537
1836538
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CTGTCCGCCAGCCGCGGCCGGAGTACGGTTAAG
1836603
1836604
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
TGTAAAACGTTGCATCATCCATCGTGACCTTCTGC
1836671
1836672
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
CGGATATTGGCGTGTCCACATGAACAACGACTT
1836737
1836738
ATTTCAATCCACGCTCTCCGTGAGGAGAGCGAC
1836770
Left flanking sequence : Till position 1831393 (length
bp)
CTCAACCGCGTGTAGGCGATACCGGTCAACGCATCCAACTGGAGCAACGTCAACCCGCAACGCTCACGCC
GTTCACGCAATCCCATGGCCGCTCCCATCA
Right flanking sequence : From position 1836770 (length
bp)
TGCACAGATGGACAGCATGTTTCACATTGTGGAACATCTATCCTTCGTACAAGTTCAAGAGTAGCAGGGT
TTGAAGTCAAAACCCGTTATTCTAATCACT
Print the CRISPR sequence : From position
bp To position
bp