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CRISPRs details
NZ_CP006649_1
Flanking alignement tool
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NZ_CP006649_1                                                                                                                 
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Strain :
Riemerella anatipestifer CH3 GCF_000734055
RefSeq :
NZ_CP006649 (chromosome circular)
CRISPR id :
NZ_CP006649_1
DR consensus (47 bp) :
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
Number of repetitions :
11
Begin Position :
1594898
End Position :
1595713
1594898
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
GTAGCTATTTTACCCATTTCAGGGCGTTTG
1594974
1594975
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TTTCCTGCCCTTAATAATTTTAGCGATAAA
1595051
1595052
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TAACCCGCCAAATCGCCTGTTTGGAAAATA
1595128
1595129
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TATTGTTGCTAAATGCTCTTAGTATAAAGA
1595205
1595206
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
ACACGCACGAGGCGTAATTTATGTACGAAA
1595282
1595283
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TCTGGCGGCGCCACCCAAAAAAAGTTGTCG
1595359
1595360
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
GCCTGTGCCTGTGCGTATGAGTTAGAGGCT
1595436
1595437
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
GTGTCGCTAAACTTTAAATTTTCGTGATAT
1595513
1595514
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
GCTATGGGTGCGTGGCTAGACTTTGTAGAA
1595590
1595591
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
GCACAATTCACACTTAAAAAACAAAATAG
1595666
1595667
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
1595713
Left flanking sequence : Till position 1594898 (length
bp)
AAAAAGGATTTACTAAAGTAGAAATAGACAAGAAATAGTGAAAAATCTAATCCTAATAAAAAGCAAAACC
CATTGAAAAACAACGGGTTTATTTTTTGAG
Right flanking sequence : From position 1595713 (length
bp)
TATGCGGTTTGTCATCACTAGAAAACAGATGGCTTAAATAACTTCTATCTAGTAACAGGTCTTTTGTTAG
GTCTTTTCGTTTAATACCTAGCTCTTTTAT
Print the CRISPR sequence : From position
bp To position
bp