Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP006687_2                                                                                                                 top


Strain : Campylobacter jejuni subsp. jejuni NCTC 11168-mcK12E5 NCTC 11168-mcK12E5 GCF_000830825 RefSeq :NZ_CP006687 (chromosome circular)
CRISPR id : NZ_CP006687_2
DR consensus (36 bp) : GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATNumber of repetitions :5
Begin Position : 1455115 End Position : 1455414

1455115ATTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTATGGCAGTTTTTAAAAGAGCTTGGCGGTT1455180
1455181GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTTTCCAAAGTTTCATTAGTTGAATTTAACT1455246
1455247GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATCTACAAGAATGAGGATGATGATATTTTACA1455312
1455313GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATATGAGTGTGCTAAAAAAAATGGACTTAAAT1455378
1455379GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT1455414
Left flanking sequence : Till position 1455115 (length bp)
TTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTCGCAACCTCCTTTTAGTGGAGTAATTAG
CCCTAGTGGAGTTTCAATCCACTAGGGTTT
Right flanking sequence : From position 1455414 (length bp)
AGATATTTACCAGATAATGAAAATTTCGGGGTTTTTTCATGAAAAATAGCAAAAATTATGCTATAATCTC
ATAAGAAATTTAAAAAGGGACTAAAATAAA
Print the CRISPR sequence : From position bp To position bp