Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP006748_2                                                                                                                 top


Strain : Yersinia pestis 8787 GCF_001188755 RefSeq :NZ_CP006748 (chromosome circular)
CRISPR id : NZ_CP006748_2
DR consensus (28 bp) : TTTCTAAGCTGCCTGTGCGGCAGTGAACNumber of repetitions :6
Begin Position : 1439419 End Position : 1439747

1439419TTATTGGGCTGCCTGTGCGGCAGTGAACGTTATACCCCGCGCAGGGAGTGAAGCGTTGAC1439478
1439479TTTCTAAGCTGCCTGTGCGGCAGTGAACTTAAGTTCTTTTTGTCAGCATCTTTAATAAAT1439538
1439539TTTCTAAGCTGCCTGTGCGGCAGTGAACCTGAAATACAAATAAAATAAATCGTCGAACAT1439598
1439599TTTCTAAGCTGCCTGTGCGGCAGTGAACTTGGCAATCATGTTTGGCTGCGCTTGGTTAAAC1439659
1439660TTTCTAAGCTGCCTGTGCGGCAGTGAACTGTCAGGCTGGGACTCTGATTTTTCAATTCGT1439719
1439720TTTCTAAGCTGCCTGTGCGGCAGTGAAC1439747
Left flanking sequence : Till position 1439419 (length bp)
GACGATAAAGAGAAACTTGCGCTGCTAAAAGCGTTGTTTGAATATGCCAAGGGATTAGTGAGTTAATATT
TGCAGATAAAACGCCGCCAGAGAGCTGAGA
Right flanking sequence : From position 1439747 (length bp)
GTAAGATAATACGGATAACCCGATGTTTATCAATGAGCAATGGCGCAAAATGCGTAAAAACCCTTTTTTT
AGTGAAATACCTGAGTAGCATAAAAATCAA
Print the CRISPR sequence : From position bp To position bp