Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP006798_1                                                                                                                 top


Strain : Klebsiella pneumoniae subsp. pneumoniae PittNDM01 GCF_000733255 RefSeq :NZ_CP006798 (chromosome circular)
CRISPR id : NZ_CP006798_1
DR consensus (28 bp) : GAAACACCCCCACGTGCGTGGGGAAGACNumber of repetitions :13
Begin Position : 1170138 End Position : 1170905

1170138AGAAACACCCCACGTACATGGTGAAGACAGAACGAATGCCCGCGCTGGTACGGCGCGTCGTGGATTCCA1170206
1170207GAAACACCCCCACGTGCGTGGGGAAGACTGCCGGATATCATCACCGCGATTAAACGGCGGA1170267
1170268GAAACACCCCCACGTGCGTGGGGAAGACATATTGAGTACGACCGCGGCGGAGACTGGTATG1170328
1170329GAAACACCCCCACGTGCGTGGGGAAGCCCCCTGCCCGGGTAGACGTAAACCTGCCCCGTCG1170389
1170390GAAACACCCCCACGTGCGTGGGGAAGACACATAGCCGCCATCCCTTTCGAAAACGCGGGTG1170450
1170451GAAACACCCCCACGTGCGTGGGGAAGACGCGTGGAAGCGGATCCGGGCGATGCTGTGCGAG1170511
1170512GAAACACCCCCACGTGCGTGGGGAAGACTCATGCTGCTCTATCTCCAAATCGCGCCTTCCA1170572
1170573GAAACCCCCCCACGTGCGTGGGGAAGACGTATCAACCTGAGATTTTGTTTTCTTGAGTGTA1170633
1170634GAAACACCCCCACGTGCGTGGGGAAGACGTCATCGTCTCACCCAGCTGGCGCAGATCGGTG1170694
1170695GAAACACCCCCACGTGCGTGGGGAAGACAGGTTGCTCCTGGCGGCGTTACCGCCGCCGCTG1170755
1170756GAAACACCCCCACGTGCGTGGGGAAGACATTCAGCTGAAAACTGCCAGTATCGCGGCGGTA1170816
1170817GAAACACCCCCACGTGCGTGGGGAAGACTCGCCGTCGAAGTGCTGCGCGATAGGGATGATA1170877
1170878GAAACACCCCCACGTGCGTGGGGAAGAC1170905
Left flanking sequence : Till position 1170138 (length bp)
GAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAAGTCCCACATGTGTAGGGAAGACTC
CAGTACGCCAATGCTGGTAGACCCCTCACA
Right flanking sequence : From position 1170905 (length bp)
ACCAACATATTGTGAAAGAGCGAGAGTTTAACCACAATATCCACGTATTACGACAGTTTTAGGGTTTCAA
TAATCAGCTGTAACCCACTGAGATCAATAA
Print the CRISPR sequence : From position bp To position bp