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CRISPRs details
NZ_CP006862_2
Flanking alignement tool
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NZ_CP006862_2                                                                                                                 
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Strain :
Listeria monocytogenes serotype 1/2a str. 88-0478 GCF_000513695
RefSeq :
NZ_CP006862 (chromosome circular)
CRISPR id :
NZ_CP006862_2
DR consensus (28 bp) :
TTTTAGTTACTTATTGTGAAATGTAAAT
Number of repetitions :
8
Begin Position :
539210
End Position :
539686
539210
TTTTAGTTACTTATTGTGAAATGTAAAT
ACAGATCAAACTCCGGAAGGGTGATTGTAAATGGCG
539273
539274
TTTTAGTTACTTATTGTGAAATGTAAAT
TGCTCTCTTTTGTGTAAAGCACATCAAGCATGTAGCG
539338
539339
TTTTAGTTACTTATTGTGAAATGTAAAT
GCGATTTTTGTCAAAGGGACAGCGATGGGTTACAAG
539402
539403
TTTTAGTTACTTATTGTGAAATGTAAAT
TTTTCTACTCCTGCTTCTAAAATGTCGTTTATAAG
539465
539466
TTTTAGTTACTTATTGTGAAATGTAAAT
CTAAAACATCCTTCACTGTATCAACTCCTTTCTATA
539529
539530
TTTTAGTTACTTATTGTGAAATGTAAAT
AAAATAGGAGGAAATAAATTATGACTATCAAATTAAG
539594
539595
TTTTAGTTACTTATTGTGAAATGTAAAT
TTTGTTGAATCAACGGATATAGATTTTACAATTTCG
539658
539659
TTTTAGTTACTTATTGTGAAATGTAAAT
539686
Left flanking sequence : Till position 539210 (length
bp)
GGGAAATCTTCCGGATAAGAGGAGATTTTAGATGTTTCTTTGTAGGTCGACAGAAATAGCTCTTTGAGGT
AAGATGGGAGTAAGAAGAAAAGTTAGTGGG
Right flanking sequence : From position 539686 (length
bp)
TTGGTTCCTTTGGAAAACAACAATAGCGTGTAGTATTGTTTTATTCAATCATTCAGAATTGGTAAATGCA
GAAGCAGCAAAATAACCAAAAGTAATGACT
Print the CRISPR sequence : From position
bp To position
bp