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CRISPRs details
NZ_CP007040_2
Flanking alignement tool
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NZ_CP007040_2                                                                                                                 
top
Strain :
Pasteurella multocida subsp. multocida str. HN07 GCF_001956795
RefSeq :
NZ_CP007040 (chromosome circular)
CRISPR id :
NZ_CP007040_2
DR consensus (28 bp) :
GTTCACCATCGTGTAGATGGCTTAGAAA
Number of repetitions :
36
Begin Position :
352638
End Position :
354767
352638
GTTCACCATCGTGTAGATGGCTTAGAAA
TTTTTAGTTTGAATTTAAGGGCTTGTCCCTTT
352697
352698
GTTCACCATCGTGTAGATGGCTTAGAAA
ATAGATGAGGCAGAAGCTAATGCAACGGTACC
352757
352758
GTTCACCATCGTGTAGATGGCTTAGAAA
AGTCTCGGTTTATCACGTCTTTTTTTCTGCGT
352817
352818
GTTCACCATCGTGTAGATGGCTTAGAAA
GCACTTGATCCGCCACATCCTGCGGAATGGTT
352877
352878
GTTCACCATCGTGTAGATGGCTTAGAAA
TAAGCTTGTGGCAGTCGGTGTGCAAGTGCCAG
352937
352938
GTTCACCATCGTGTAGATGGCTTAGAAA
GGCTGGATCATAACGCCCACCGTTACCCGTGT
352997
352998
GTTCACCATCGTGTAGATGGCTTAGAAA
ATTTCCCATACGATTAGCATAAACTCGGTTAG
353057
353058
GTTCACCATCGTGTAGATGGCTTAGAAA
ACACCGACAACCATCGCATCTGATGCTTATCA
353117
353118
GTTCACCATCGTGTAGATGGCTTAGAAA
GCGGTATGTCGTCAGCCCAATTAAAAAACTGC
353177
353178
GTTCACCATCGTGTAGATGGCTTAGAAA
AGAAATGCTAAAAAAAATGTTAGATTTTTACAA
353238
353239
GTTCACCATCGTGTAGATGGCTTAGAAA
CTGAACGCGTTTATTTTTTCGTGAATAATAAAA
353299
353300
GTTCACCATCGTGTAGATGGCTTAGAAA
GATTTGCGAACTTGACAACGCCAACCAGATTT
353359
353360
GTTCACCATCGTGTAGATGGCTTAGAAA
ATTTCCCATACGATTAGCATAAACTCGGTTAG
353419
353420
GTTCACCATCGTGTAGATGGCTTAGAAA
ACACCGACAACCATCGCATCTGATGCTTATCA
353479
353480
GTTCACCATCGTGTAGATGGCTTAGAAA
GCGGTATGTCGTCAGCCCAATTAAAAAACTGC
353539
353540
GTTCACCATCGTGTAGATGGCTTAGAAA
ATTATTTCGTGCGTATGGGCTCCAGCCACCAC
353599
353600
GTTCACCATCGTGTAGATGGCTTAGAAA
ATAGCGGCTGAACTCTCAAAAGATTGACCGAG
353659
353660
GTTCACCATCGTGTAGATGGCTTAGAAA
TAAACAAACAAGCTAGAGATAATCCCCAGTTA
353719
353720
GTTCACCATCGTGTAGATGGCTTAGAAA
AGCTGGGCGGATTAGAGAATTTACGGTTTAAC
353779
353780
GTTCACCATCGTGTAGATGGCTTAGAAA
GTTTGAGAAAAAGGTGCTTTGCTCGACTTGTT
353839
353840
GTTCACCATCGTGTAGATGGCTTAGAAA
AACCGATCCAACTCACCATGGAGGAAGCGAAT
353899
353900
GTTCACCATCGTGTAGATGGCTTAGAAA
AAAAACCGATCTTGTGTACAAGTATCAAAAGA
353959
353960
GTTCACCATCGTGTAGATGGCTTAGAAA
CACTATTATTAATAAGTTGTTGATGTTCTGCG
354019
354020
GTTCACCATCGTGTAGATGGCTTAGAAA
TTGGTGATTCGTACAGTTGAAATCAACGGCAC
354079
354080
GTTCACCATCGTGTAGATGGCTTAGAAA
CGACGGAACACCGTTTGCAGCCCGCAAACCGC
354139
354140
GTTCACCATCGTGTAGATGGCTTAGAAA
AATTTCAATCATCTCGAAAATATCTTTACAAG
354199
354200
GTTCACCATCGTGTAGATGGCTTAGAAA
ATTGATTGAGAGTGGATATGTTTTCTCACCGA
354259
354260
GTTCACCATCGTGTAGATGGCTTAGAAA
TTTCAGTCTCTGACCGCCAGCATAGACCCAAC
354319
354320
GTTCACCATCGTGTAGATGGCTTAGAAA
AGAAGAACAAGAAAAGCAGTTGAAGAAAAAAG
354379
354380
GTTCACCATCGTGTAGATGGCTTAGAAA
TAGTAAACGCAATGAGCCTGCCGCCACAAGTG
354439
354440
GTTCACCATCGTGTAGATGGCTTAGAAA
TTGGATCGCCATACCGCCATTACCATTAATTT
354499
354500
GTTCACCATCGTGTAGATGGCTTAGAAA
ATAAAGTTTCCCGCGCTAAAAAATCATATTAT
354559
354560
GTTCACCATCGTGTAGATGGCTTAGAAA
GACCCCATTGGTCTAATTTCGCCCACGGGATT
354619
354620
GTTCACCATCGTGTAGATGGCTTAGAAA
TTCCGCATATTCAACCGTATTATCTTCAGTTG
354679
354680
GTTCACCATCGTGTAGATGGCTTAGAAA
GCAAGTGGCACTTGTGCGATTGAGCCGTATTT
354739
354740
GTTCACCATCGTGTAGATGGCTTAAAAA
354767
Left flanking sequence : Till position 352638 (length
bp)
AATAAGATCAAAGGGTTATTGTTCTACCCTAAAAAAGGGTTTTCTTTTCAGATGTTCTTTAACAAATTGA
AATATCCGAAGATATAACAAAATTCATTTA
Right flanking sequence : From position 354767 (length
bp)
ACTCATAATCGGAAGAGAGCGAGTTCGAATCGTTCATTATAGACTAGATAGTGTAAACCCTCGCCGGTTT
TTAAGACCGGTGTATCCAATGCCGTTAAGC
Print the CRISPR sequence : From position
bp To position
bp