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CRISPRs details
NZ_CP007235_3
Flanking alignement tool
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NZ_CP007235_3                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1899 GCF_000941015
RefSeq :
NZ_CP007235 (chromosome circular)
CRISPR id :
NZ_CP007235_3
DR consensus (29 bp) :
CGGTTTATCCCCGCTGGCGCGGGGAACAC
Number of repetitions :
20
Begin Position :
3867346
End Position :
3868534
3867346
ACGGCTATCCTTGTTGGCGCGGGGAACAC
ATCTTCATATTGCGTGACGCTGCCGATGAACG
3867406
3867407
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCTTTATCAGCTAACCATTTCCAGAACTCGTC
3867467
3867468
CGGTTTATCCCTGCTGGCGCGGGGAACAC
TATAATATGAATTAATTTTTGCGCATAACCTG
3867528
3867529
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
3867589
3867590
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCGTAATGGGCTACCTGAACTTCACATATCC
3867650
3867651
CGGTTTATCCCCGCTAGCGCGGGGAACAT
ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
3867711
3867712
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CGTATTCGTCACACAGCCCCGTCCAGAAATGA
3867772
3867773
CGGTTTATCCCCGCTGGCACGGGGAACAC
TAACGAACTGAATAAAATGTCAGAAAGTGACG
3867833
3867834
CGGCTTATCCCCGCTGGCGCGGGGAACAC
GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
3867895
3867896
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCCAGTGACTACAGAAGCGTCTCTATCGGGG
3867956
3867957
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
3868017
3868018
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCGACGTGGACGAGGAGTTACTCAACCGCTGC
3868078
3868079
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AGCGCCACATGGCCCACCGGCACCACCCGATC
3868139
3868140
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AAATGACCAAATCAGAAATCTTCACCAAAGCC
3868200
3868201
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TAATGGCCACAGTAAGTCAAACGGTTCTGGAA
3868261
3868262
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GAGTCCGGGGGTTATATAGTTATTTAATGAGC
3868322
3868323
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GATGTAACTGATAGCGAAATATATTGGGATAA
3868383
3868384
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GAAACGTAAACAGGGTAAGATACAACTCTGCA
3868444
3868445
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGTAAAGGGTGGTCTGGAAGGGGATCGGCAAA
3868505
3868506
CGGTTTATCCCCGCTGGCGCGGGGAACAC
3868534
Left flanking sequence : Till position 3867346 (length
bp)
CATGGCCTTCTCCTGTCTAAAAGCCTCCCCGGGAAAACGCGGCCTTTTTACTTTACAGGTTTGTAGCTGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 3868534 (length
bp)
ACTAAACGGATATAATTGTTTATAAACTACTTTTTGTCAGCACCACATTCTACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position
bp To position
bp