Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007394_2                                                                                                                 top


Strain : Escherichia coli GCF_000599705 RefSeq :NZ_CP007394 (chromosome circular)
CRISPR id : NZ_CP007394_2
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACTCNumber of repetitions :5
Begin Position : 3682120 End Position : 3682391

3682120TGGTTTATCCCCGCTGACGCGGGGAACTCATCAGTGATATCCAGCATTGCGGAGCTAAACG3682180
3682181CGGTTTATCCCCGCTGGCGCGGGGAACTCATCGGCATCACAACCGATGGAATAACCAGCT3682240
3682241CGGTTTATCCCCGCTGGCGCGGGGAACTCCGATTGTATATATTGTCGCCGGGTTGATTTTC3682301
3682302CGGTTTATCCCCGCTGGCGCGGGGAACTCGCAAATGAATCCTTCGCGCTGGACATCCTGCG3682362
3682363CGGTTTATCCCCGCTGGCGCGGGGAACTC3682391
Left flanking sequence : Till position 3682120 (length bp)
TATGGAGAGCTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTAATACGAGTACTGCTAATATAAA
ATCTTGAGAAAGAGATAACGGGTTATATGG
Right flanking sequence : From position 3682391 (length bp)
ACTAAACATAACCTATTATTAATTATTGATTTTTTAAGTCAGTCACAATCTACCAACTTAACAGAAACAC
ACAAACAACACATCCATTATGTTAAAGAGC
Print the CRISPR sequence : From position bp To position bp