Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007543_1                                                                                                                 top


Strain : Synechocystis sp. PCC 6714 GCF_000478825 RefSeq :NZ_CP007543 (plasmid pSYLA circul)
CRISPR id : NZ_CP007543_1
DR consensus (36 bp) : GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACNumber of repetitions :15
Begin Position : 56272 End Position : 57341

56272GTTTTAAATCAGTTAATTTCTCCTACGAGTCGAGACACTGAAGCTGGAATTCTAAAAAAAGTATTAAGAACT56343
56344GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACGAATCATGACTACATTAACCTTTGTTCAATCTCTA56414
56415GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACTCAAAGTAAAAAAGAAAGATCGAATATTCCTAGAAGACGG56490
56491GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACTACGGAATGTGAACATAGTAGTGCCGTGGGCGACTAC56563
56564GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACGAGTTGGGATCATTTACTCCCCAAGACTTCATCAG56634
56635GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACTCCTTCTTTATAACTAAATTGTCACCGGCGTTTATC56706
56707GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACCTTCTTTAGACAAAAAATCAATAAAAGAACTACGCAA56779
56780GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACAACAACATGGACTTCCTCAATCTTCTGTTTGTTTA56850
56851GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACAACAACATGGACTTCCTCAATCTTCTGTTTGTTTA56921
56922GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACTGCATTGCAGCGAACAGATCGACTGGCTGGCGGCACAT56995
56996GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACATTGGTTGTGTGGCTGGAATCGCCTCAAGAACAACCTTT57070
57071GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACACAGCGGGCTGTATCAGCCCAACGGCAAGGAAGTTATCTATTTCCTG57153
57154GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACATGTTTGGCATCCATGCTGCTCCTTACAACCTTTTTGCG57228
57229GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGACCCGTGCTAAAAACAGCGCTTGCACTGCCCGCCCGGTCGGTA57305
57306GTTTCCAATCAATTAATTTCTCCTACGAGTGGAGAC57341
Left flanking sequence : Till position 56272 (length bp)
ACAACCCCTTTTCTTGATTTTTTATTCAGTACGAATTTTAAAAACACCGTATACTCCTGGTGATCCAAGG
GAGTCTTGCTGGCAATTATTACCGTAGCGA
Right flanking sequence : From position 57341 (length bp)
TGTCTCCATTTTAAAGCCTTACGGGACAAGGCATCCAATCCTCATTTGCGAGGCTCAGCAAAAACTGACT
ATAATCGGAAAAGCTCAATGTAAAAATAGC
Print the CRISPR sequence : From position bp To position bp