Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007559_2                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 GCF_000973685 RefSeq :NZ_CP007559 (chromosome circular)
CRISPR id : NZ_CP007559_2
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :19
Begin Position : 995791 End Position : 996918

995791GTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATTTACCCGCCACTTATTCCCCATTGCAT995851
995852GTGTTCCCCGCGCCAGCGGGGATAAATCGGGACTATCAAACCATCTATGATGCCAATTTTA995912
995913GTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGGGGCTGGTATTCGATACAGACCCGGCTA995973
995974GTGTTCCCCGCGCCAGCGGGGATAAACCGGGAATAAAAATGAATTTGAGTCAACTCTATAA996034
996035GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGAATATGGTGATAATGTTGCACCTTCGCTC996095
996096GTGTTCCCCGCGCCAGCGGGGATAAACCGGACTCGGCCTGTTTTTTGATTTTGACAATCAG996156
996157GTGTTCCCCGCGCCAGCGGGGATAAACCGCCAATAACCGACGAGGGCAAACGCCGTGCGCG996217
996218GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGACGAAAATCAGCCCGCATATTCCGACACA996278
996279GTGTTCCCCGCGCCAGCGGGGATAAACCGAACAGTGGTTTTAGGTTGTCGGTGCTGATCCC996339
996340GTGTTCCCCGCGCCAGCGGGGATAAACCGATTAAACAACAGGATTTTGCAATTACTGTTGG996400
996401GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGACGGCAGCAGCGTGAAACACGTCAGTATT996461
996462GTGTTCCCCGCGCCAGCGGGGATAAACCACCAATAACCGAAATATCCACGGTGGAAATTTC996522
996523GTGTTCCCCGCGCCAGCGGGGATAAACCGTCAGCTGTTCCATACTCACCCCCTGTGCAATC996583
996584GTGTTCCCCGCGCCAGCGGGGATAAACCGGCGATGTATGCCGCGACGATCGAGAGCGAACT996644
996645GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGCAGATGAAAAATATTTACAGATTGGTAAA996705
996706GTGTTCCCCGCGCCAGCGGGGATAAACCGGGGCGAAAACGCGCTTTGAAATTCGCACGGTC996766
996767GTGTTCCCCGCGCCAGCGGGGATAAACCGAAAAAATCCCGCTGACAATATTTTGCCACCTC996827
996828GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGACGACCCGATGGGGATCCTGCCGTTGCT996888
996889GTGTTCCCCGCGCCAGCGGGGATAAACCG996917
Left flanking sequence : Till position 995791 (length bp)
ATCAACTAAAGGGCGTAGCTGTCCATTAATGTCTTTTCTGGCGAGATAAACATCAACACTCTCTTCACCC
AGACGGGTAGAAAATTCTCTATCTTTATCC
Right flanking sequence : From position 996918 (length bp)
GAGTATTTGAAATGTACTATAAGGACTTCATGTGTTCCCCGCGCCAGTTCTTCAGCTGGCAACGACAGAA
TGCGTGTTCCCCGCGCCAGCGGGGATAAAC
Print the CRISPR sequence : From position bp To position bp