Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009085_1                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Enteritidis GCF_000750395 RefSeq :NZ_CP009085 (chromosome circular)
CRISPR id : NZ_CP009085_1
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :10
Begin Position : 2954692 End Position : 2955269

2954692GTGTTTATCCCCGCTGACGCGGGGAACACTATTTATAAGCGTGTCATCTATGCAACCCAAC2954752
2954753CGGTTTATCCCCGCTGGCGCGGGGAACACACCTGCCCGACCCAATAAGGAGGCCCTCGTGA2954813
2954814CGGTTTATCCCCGCTGGCGCGGGGAACACGGCCGCTGGTCAAATTCCCAATCTGAGCAATC2954874
2954875CGGTTTATCCCCGCTGGCGCGGGGAACACATAGCCCCGGCAGCGATAGCTAAACCAGTTCC2954935
2954936CGGTTTATCCCCGCTGGCGCGGGGAACACGCCTCAAAATCTCTCGGTGAGATGTAAGCGTC2954996
2954997CGGTTTATCCCCGCTGGCGCGGGGAACACACCAGTGGTCAGCGGCGGATGAATTTGCCCTG2955057
2955058CGGTTTATCCCCGCTGGCGCGGGGAACACGAGAATGCTCATGCGCGTGAGCGCCATATATT2955118
2955119CGGTTTATCCCCGCTGGCGCGGGGAACACCATGGCAATTTTACGGCGGACGTGCTCGCTCT2955179
2955180CGGTTTATCCCCGCTGGCGCGGGGAACACAGGCGGACCGAAAAACCGTTTTCAGCCAACGT2955240
2955241CGGTTTATCCCCGCTGGCGCGGGGAACAC2955269
Left flanking sequence : Till position 2954692 (length bp)
GGCGAATTGAGCGCCGTAGCCGCGATGTAGTACGGATAATGCTGCCGTTGGTAAAAGAGCTGGCGAAGGC
GGAAAAAACGTCCTGATATGCTGGTGAAAC
Right flanking sequence : From position 2955269 (length bp)
ACTAAAACTATATATTTGTTCTAAAAGCCCTTTTTTACTACATAACAAACTACCAACGGTAAGATAACAA
TTCCTTATCATTAAAGAACATTCAACTTAT
Print the CRISPR sequence : From position bp To position bp