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CRISPRs details
NZ_CP009159_2
Flanking alignement tool
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NZ_CP009159_2                                                                                                                 
top
Strain :
Actinobacillus suis ATCC 33415 GCF_000739435
RefSeq :
NZ_CP009159 (chromosome circular)
CRISPR id :
NZ_CP009159_2
DR consensus (36 bp) :
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
Number of repetitions :
16
Begin Position :
559621
End Position :
560646
559621
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
CCTAAGAATGTTGTTATCAATATTGATTCA
559686
559687
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
CACTATGTTTGCCTTATCTGCTATTGGATC
559752
559753
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
GACAGCATTAATATCGCGATCCGCATCCTC
559818
559819
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
TATAACCGATAAATTGCCAATCATCGGTAA
559884
559885
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
AAAACGTGAGAGAATTTATTCATTTTTGGA
559950
559951
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
CGCTGTTGGATATTTGAGTGGCCAACACTT
560016
560017
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
TTCGTTTACCGCATCATAGTTAAAGCCTTC
560082
560083
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
AAAAAATGCGAAAAATGGCAGCAATATTGA
560148
560149
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
GGAATTTATGAGCCATGTAATATCTATCCC
560214
560215
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
TACACCGTTTGAGCAAGAAGTGCCCTGATT
560280
560281
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
CTTTCGCTCTCGCTTTGGCTCGCCCCATTT
560346
560347
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
AGTGGTTGAGGGTAATGCCTAATGTATGCG
560412
560413
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
ATTCTGACCGGGTTTAACAGATATGCTGTC
560478
560479
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
TAGGACGGAGCTTATACCTTCGTAAAGCAA
560544
560545
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC
GCAGTGAATGAAGTGATGTAAGCATATAAA
560610
560611
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACGAC
560646
Left flanking sequence : Till position 559621 (length
bp)
AAAAAAGGTGAATTCGAACCAACTTTTACTGTTTTAAGGCAATTTTTTTAATAATAAAAAAGCCTTGAAC
CCTTACTGCTCAAGGCTTTTTAGAGTCCCG
Right flanking sequence : From position 560646 (length
bp)
TCCTGACGAAGTCGTGTACCAGAGTCGAATTGTAGCTATGTGAAATAACTAAGAAAGCTTATTTATACAC
CTGTGGTATTGAGTATTCAATTTGCTGTTT
Print the CRISPR sequence : From position
bp To position
bp