Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009427_5                                                                                                                 top


Strain : Mycobacterium tuberculosis GCF_000756545 RefSeq :NZ_CP009427 (chromosome circular)
CRISPR id : NZ_CP009427_5
DR consensus (36 bp) : GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACNumber of repetitions :31
Begin Position : 3132443 End Position : 3134678

3132443CATGCCGGGGCGGTTCAGGGTTTTGGGTCTGACGACTCGCGGCGAGCACGTCTCACCCAGCAGGCGGTGAGGTTGG3132518
3132519GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACGGACGAGCTGGACCGCATCAGCGATGCTGAGCTGAGG3132593
3132594GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTGTCTCAATCGTGCCGTCTGCGGTGACACGCTCCAA3132666
3132667GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCACCAGGATCAGCGCCAAGCCAGTTAGCGCAATCCA3132738
3132739GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTCCCGGACCATCTGCAGCTCGCCCGGGTCCATGCG3132810
3132811GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCGGAGTCATCCGCGCGGGCCGGCGCGATTGTTGCCGG3132883
3132884GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTGGCGATTTACGACGCTGACGGGAACTCGTGCGAAT3132955
3132956GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGATCCGCGAAATTCACTGCGCGTTATTCAAG3133016
3133017GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCGAGCCGACCATCCGCATCACACCGAAAGGGTTGGCGCAA3133093
3133094GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACGTGGGGAGAGGGAATGGCAATGATGGTCGACGAA3133165
3133166GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTCGGACAGCATCTCCCCGGGCGGGCAGCAGATATCCCAT3133241
3133242GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCGACCCGTGGCCGCCAGGTTGCCGCCGCCGTTGCTCACCTG3133318
3133319GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCGGAAGTCAACTAGAGCGGGTGTCGAACGCTGCCCG3133391
3133392GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACATGCGAATCCGCTGTCAGCACATGGGATTCCGAGT3133462
3133463GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTAGGCGGCCCCGGCGAGGCTGGGGGCGGTTTCACGC3133535
3133536GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACGCGGAGCTGCGGCGCCGGATGATGGCGTTGCTCAAGAGCA3133611
3133612GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCAAAAACGGGGACGGCATGCTGCATGCCCTAACGTCGT3133686
3133687GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCAGCGCAGACGGCAGCCCCGAGTACTCGCTCTCCTCAG3133760
3133761GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACAGGCTGAAATTGAAGCCGGAAATGACGACGCATTGGT3133833
3133834GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTAAGCCCGCTAATCCCGCACAAGTGGTCAGAAAA3133904
3133905GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTGATGATTGGTCGGCGTATGACGTGCTACTGAGGTGTT3133979
3133980GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACCCCTGAGCCACGGCATGTGCACGGCTCCGTGTTCAA3134053
3134054GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCGGCGTGTCCTCTCGCAGCGTCGCCGTCCCCGATATGG3134128
3134129GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCGATGAATGATGCGCGCCAGCGGTAACGCGTGGGATGT3134203
3134204GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCTGAAAATTCGTGGTCAACGAATTGTCGTCGAAAT3134275
3134276GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACGGGCCGTGGGGCACTTACGGCGACGGCGCACAT3134346
3134347GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCCCTAGCCACGCCTGCCGTGCCATGCCGCGCCGCGA3134419
3134420GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTGGTCAAAAGCTGTCGCCCAAGCATGAGGCAAAAA3134491
3134492GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACGACTAGGGGAGCGTGATCCAGAGCCGGCGACCCTCTATG3134568
3134569GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACGTGCAAGAATTCCGGGTTGCAGTGCAACACGGTTTTAA3134642
3134643GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC3134678
Left flanking sequence : Till position 3132443 (length bp)
TGCGACCATCCGCACCGCCCGCTCACGCAGCTCCGGCGGGTACCTCCTCGATGAACCACCTGACATGACC
CCATCCTTTCCAAGAACTGGAGTCTCCGGA
Right flanking sequence : From position 3134678 (length bp)
TCTATGGACAATTCGTCCAGCGTGTGGTAACAATGCCTGCTGATGATGTCAAAAGAACACAAACTCCTCT
GCGCTGACAAGCCGTCCCCTTCCGTAGAAC
Print the CRISPR sequence : From position bp To position bp